RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 IQANK1A0A1B0GTG1 560 aa9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 WDR27A2RRH5 827 aa9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 ZNF98A6NK75 572 aa9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 EVPLLA8MZ36 301 aa9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 HACD1B0YJ81 288 aa9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 M0QZQ0 153 aa9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 CHRM5P08912 532 aaPredicted RBP9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 PSKH1P11801 424 aa9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 AKR1A1P14550 325 aa9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 DDCP20711 480 aa9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 RPL9P32969 192 aaKnown RBP9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 ADRA1BP35368 520 aa9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 MAGEA12P43365 314 aa9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 SCRN3Q0VDG4 424 aa9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 ZNF846Q147U1 533 aa9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 ZNF124Q15973 351 aa9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 C5orf22Q49AR2 442 aa9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 VARS2Q5ST30 1063 aaKnown RBP9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 TIFABQ6ZNK6 161 aa9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 RTN4RL1Q86UN2 441 aaPredicted RBP9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 GRPEL2Q8TAA5 225 aa9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 TFB1MQ8WVM0 346 aaKnown RBP9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 LINC01599Q8WXQ3 324 aa9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 LRRC39Q96DD0 335 aa9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 MSANTD3Q96H12 275 aa9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 KLHL32Q96NJ5 620 aa9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 INTS7Q9NVH2 962 aaKnown RBP9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 CD274Q9NZQ7 290 aa9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 SIRPGQ9P1W8 387 aa9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 TAGLN3Q9UI15 199 aa9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 LRFN2Q9ULH4 789 aa9.48□□□□□ -0.89
RBFOX1-201ENST00000311745 LOC100653049A0A140TA62 436 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 MANSC4A6NHS7 340 aaPredicted RBP9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 TRIM49D1C9J1S8 452 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 I3L521 148 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 M0QYT0 321 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 RNF103O00237 685 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 TNFRSF10BO14763 440 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 KLF11O14901 512 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 CPNE3O75131 537 aaKnown RBP9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 SNNO75324 88 aaPredicted RBP9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 SPAG6O75602 509 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 KRT34O76011 436 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 TOMM70O94826 608 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 TRIM16O95361 564 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 PROCP04070 461 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 USP17L7P0C7H9 530 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 PTPN3P26045 913 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 PSMB4P28070 264 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 HOXC13P31276 330 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 STX3Q13277 289 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 TOP3AQ13472 1001 aaPredicted RBP9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 MBTPS1Q14703 1052 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 TAF2Q6P1X5 1199 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 SNAPC3Q92966 411 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 ACDQ96AP0 544 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 TNIP3Q96KP6 325 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 ZNF641Q96N77 438 aaPredicted RBP9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 FAM111AQ96PZ2 611 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 TINAGL1Q9GZM7 467 aaPredicted RBP9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 PRDM12Q9H4Q4 367 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 SP110Q9HB58 689 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 HMG20AQ9NP66 347 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 SPATA2Q9UM82 520 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 DIMT1Q9UNQ2 313 aaKnown RBP9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 PCDHGA7Q9Y5G6 932 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 RAD54BQ9Y620 910 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 A0A0X1KG70 313 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 PRR5-ARHGAP8B1AHC4 643 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 AGRPO00253 132 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 TOR1AO14656 332 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 CACNG3O60359 315 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 PRMT3O60678 531 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 RFPL2O75678 378 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 BGNP21810 368 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 FGFR3P22607 806 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 CCND3P30281 292 aaPredicted RBP9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 CXCR3P49682 368 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 ZNF157P51786 506 aaPredicted RBP9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 MLLT10P55197 1068 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 VBP1P61758 197 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 ARHGAP8P85298 464 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 NFATC3Q12968 1075 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 PEX6Q13608 980 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 UBAP2LQ14157 1087 aaKnown RBP9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 CDK10Q15131 360 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 TTC39BQ5VTQ0 682 aaPredicted RBP9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 PLEKHG7Q6ZR37 379 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 POC5Q8NA72 575 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 COLGALT1Q8NBJ5 622 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 LHFPL5Q8TAF8 219 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 SOCS4Q8WXH5 440 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 ISL2Q96A47 359 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 CEP19Q96LK0 163 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 SEMA6AQ9H2E6 1030 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 SYBUQ9NX95 663 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 NUP50Q9UKX7 468 aa9.47□□□□□ -0.89
RBFOX1-201ENST00000311745 CASTOR2A6NHX0 329 aa9.46□□□□□ -0.89
RBFOX1-201ENST00000311745 PRSS44E7EML9 344 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms