RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 FOXP3Q9BZS1 431 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 CYP4F12Q9HCS2 524 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 CATSPERZQ9NTU4 200 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 NFU1Q9UMS0 254 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 PCYT1BQ9Y5K3 369 aaPredicted RBP12.76□□□□□ -0.37
APTX-201ENST00000309615 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.76□□□□□ -0.37
APTX-201ENST00000309615 FAM169AQ9Y6X4 670 aa12.76□□□□□ -0.37
APTX-201ENST00000309615 ADAMTS9Q9P2N4 1935 aa12.75□□□□□ -0.37
APTX-201ENST00000309615 RALGAPA1Q6GYQ0 2036 aa12.75□□□□□ -0.37
APTX-201ENST00000309615 WDR87Q6ZQQ6 2873 aa12.75□□□□□ -0.37
APTX-201ENST00000309615 EIF3HO15372 352 aaKnown RBP eCLIP12.75□□□□□ -0.37
APTX-201ENST00000309615 CD3EAPO15446 510 aaKnown RBP12.75□□□□□ -0.37
APTX-201ENST00000309615 TTC4O95801 387 aa12.75□□□□□ -0.37
APTX-201ENST00000309615 CSF2P04141 144 aa12.75□□□□□ -0.37
APTX-201ENST00000309615 NME1P15531 152 aaKnown RBP12.75□□□□□ -0.37
APTX-201ENST00000309615 ZNF8P17098 575 aaPredicted RBP12.75□□□□□ -0.37
APTX-201ENST00000309615 ACRV1P26436 265 aa12.75□□□□□ -0.37
APTX-201ENST00000309615 HK3P52790 923 aa12.75□□□□□ -0.37
APTX-201ENST00000309615 ATXN3P54252 364 aaPredicted RBP12.75□□□□□ -0.37
APTX-201ENST00000309615 IL9RQ01113 521 aa12.75□□□□□ -0.37
APTX-201ENST00000309615 PPARDQ03181 441 aa12.75□□□□□ -0.37
APTX-201ENST00000309615 SHBQ15464 509 aa12.75□□□□□ -0.37
APTX-201ENST00000309615 DBN1Q16643 649 aa12.75□□□□□ -0.37
APTX-201ENST00000309615 LONRF1Q17RB8 773 aa12.75□□□□□ -0.37
APTX-201ENST00000309615 ZNF423Q2M1K9 1284 aa12.75□□□□□ -0.37
APTX-201ENST00000309615 FASTKD1Q53R41 847 aaKnown RBP12.75□□□□□ -0.37
APTX-201ENST00000309615 SPANXN3Q5MJ09 141 aa12.75□□□□□ -0.37
APTX-201ENST00000309615 LDLRAP1Q5SW96 308 aa12.75□□□□□ -0.37
APTX-201ENST00000309615 CCNJLQ8IV13 435 aa12.75□□□□□ -0.37
APTX-201ENST00000309615 MINDY1Q8N5J2 469 aa12.75□□□□□ -0.37
APTX-201ENST00000309615 PYROXD1Q8WU10 500 aa12.75□□□□□ -0.37
APTX-201ENST00000309615 ULK4Q96C45 1275 aa12.75□□□□□ -0.37
APTX-201ENST00000309615 FMO2Q99518 471 aa12.75□□□□□ -0.37
APTX-201ENST00000309615 PHACTR1Q9C0D0 580 aa12.75□□□□□ -0.37
APTX-201ENST00000309615 ANKZF1Q9H8Y5 726 aa12.75□□□□□ -0.37
APTX-201ENST00000309615 C20orf96Q9NUD7 363 aaPredicted RBP12.75□□□□□ -0.37
APTX-201ENST00000309615 VPS18Q9P253 973 aa12.75□□□□□ -0.37
APTX-201ENST00000309615 MTRF1LQ9UGC7 380 aaKnown RBP12.75□□□□□ -0.37
APTX-201ENST00000309615 SUFUQ9UMX1 484 aa12.75□□□□□ -0.37
APTX-201ENST00000309615 KNL1Q8NG31 2342 aa12.75□□□□□ -0.37
APTX-201ENST00000309615 SDC3O75056 442 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 DNAJC6O75061 913 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 CDK14O94921 469 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 CER1O95813 267 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 JUNDP17535 347 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 AKT1P31749 480 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 MAGEA4P43358 317 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 GNPDA1P46926 289 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 B4GALNT1Q00973 533 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 TMEM115Q12893 351 aaPredicted RBP12.74□□□□□ -0.37
APTX-201ENST00000309615 TCEA2Q15560 299 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 STEAP4Q687X5 459 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 CAPN12Q6ZSI9 719 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 PHACTR4Q8IZ21 702 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 RASGEF1AQ8N9B8 481 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 SCARF2Q96GP6 870 aaPredicted RBP12.74□□□□□ -0.37
APTX-201ENST00000309615 C9orf72Q96LT7 481 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 EDEM2Q9BV94 578 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 BOCQ9BWV1 1114 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 CARS2Q9HA77 564 aaKnown RBP12.74□□□□□ -0.37
APTX-201ENST00000309615 PRKAB1Q9Y478 270 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 DGKBQ9Y6T7 804 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 PLXNB3Q9ULL4 1909 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 A0A1B0GTQ1 180 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 CDX4O14627 284 aaPredicted RBP12.74□□□□□ -0.37
APTX-201ENST00000309615 VEGFDO43915 354 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 NUAK1O60285 661 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 GDF9O60383 454 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 RASGRP1O95267 797 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 ERVK-10P10266 1014 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 MSH3P20585 1137 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 ARRB1P49407 418 aaPredicted RBP12.74□□□□□ -0.37
APTX-201ENST00000309615 TUBB4BP68371 445 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 AASDHQ4L235 1098 aaPredicted RBP12.74□□□□□ -0.37
APTX-201ENST00000309615 HSP90AA5PQ58FG0 334 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 NEPROQ6NW34 567 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 TRMT10BQ6PF06 316 aaKnown RBP12.74□□□□□ -0.37
APTX-201ENST00000309615 DET1Q7L5Y6 550 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 GSPT2Q8IYD1 628 aaKnown RBP12.74□□□□□ -0.37
APTX-201ENST00000309615 OTUD6BQ8N6M0 293 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.74□□□□□ -0.37
APTX-201ENST00000309615 TTC25Q96NG3 672 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 COPS8Q99627 209 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 SLC13A1Q9BZW2 595 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 ZDHHC3Q9NYG2 299 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 APOBEC3BQ9UH17 382 aaKnown RBP12.74□□□□□ -0.37
APTX-201ENST00000309615 ZNHIT2Q9UHR6 403 aa12.74□□□□□ -0.37
APTX-201ENST00000309615 EP300Q09472 2414 aaPredicted RBP12.74□□□□□ -0.37
APTX-201ENST00000309615 TMEM131Q92545 1883 aa12.73□□□□□ -0.37
APTX-201ENST00000309615 TP53BP1Q12888 1972 aaPredicted RBP12.73□□□□□ -0.37
APTX-201ENST00000309615 IGLV3-16A0A075B6K0 115 aa12.73□□□□□ -0.37
APTX-201ENST00000309615 OR2AG2A6NM03 316 aa12.73□□□□□ -0.37
APTX-201ENST00000309615 CHUKO15111 745 aa12.73□□□□□ -0.37
APTX-201ENST00000309615 OR1I1O60431 355 aa12.73□□□□□ -0.37
APTX-201ENST00000309615 IVLP07476 585 aa12.73□□□□□ -0.37
APTX-201ENST00000309615 F7P08709 466 aaPredicted RBP12.73□□□□□ -0.37
APTX-201ENST00000309615 MYBL2P10244 700 aa12.73□□□□□ -0.37
APTX-201ENST00000309615 SSTR1P30872 391 aa12.73□□□□□ -0.37
APTX-201ENST00000309615 RXRGP48443 463 aa12.73□□□□□ -0.37
APTX-201ENST00000309615 BLKP51451 505 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms