RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 IGFLR1Q9H665 355 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 ASB8Q9H765 288 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 HPS4Q9NQG7 708 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 GALPQ9UBC7 116 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 DKK3Q9UBP4 350 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 B4GALT6Q9UBX8 382 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 CDH22Q9UJ99 828 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 CDH7Q9ULB5 785 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 TICRRQ7Z2Z1 1910 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 OTOL1A6NHN0 477 aaPredicted RBP11.78□□□□□ -0.52
TRIM40-205ENST00000307859 CAPN14A8MX76 684 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 SLCO1B7G3V0H7 640 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 MATN2O00339 956 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 LINC01565O15544 149 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 HNRNPCL1O60812 293 aaKnown RBP11.78□□□□□ -0.52
TRIM40-205ENST00000307859 KERAO60938 352 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 LEFTY1O75610 366 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 CBX6O95503 412 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 TSPAN12O95859 305 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 C1SP09871 688 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 MTHFD2P13995 350 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 ZNF30P17039 623 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 ZNF7P17097 686 aaPredicted RBP11.78□□□□□ -0.52
TRIM40-205ENST00000307859 SP100P23497 879 aaPredicted RBP11.78□□□□□ -0.52
TRIM40-205ENST00000307859 ACRV1P26436 265 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 TARSP26639 723 aaKnown RBP11.78□□□□□ -0.52
TRIM40-205ENST00000307859 CCR10P46092 362 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 ID4P47928 161 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 RPL14P50914 215 aaKnown RBP11.78□□□□□ -0.52
TRIM40-205ENST00000307859 CLCN7P51798 805 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 PTSQ03393 145 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 GALNT1Q10472 559 aaPredicted RBP11.78□□□□□ -0.52
TRIM40-205ENST00000307859 EIF4HQ15056 248 aaKnown RBP11.78□□□□□ -0.52
TRIM40-205ENST00000307859 SMAD2Q15796 467 aaKnown RBP11.78□□□□□ -0.52
TRIM40-205ENST00000307859 UGT3A1Q6NUS8 523 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 EPGNQ6UW88 154 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 VITQ6UXI7 678 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 CCNYL1Q8N7R7 359 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 KDM1BQ8NB78 822 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 GPR26Q8NDV2 337 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 HCAR2Q8TDS4 363 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 INPP5DQ92835 1189 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 ATOH1Q92858 354 aaPredicted RBP11.78□□□□□ -0.52
TRIM40-205ENST00000307859 FAM136AQ96C01 138 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 KLHL29Q96CT2 875 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 PLEKHG4BQ96PX9 1271 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 SLC30A3Q99726 388 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 TUBB6Q9BUF5 446 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 APOL5Q9BWW9 433 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 LRMDAQ9H2I8 198 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 CYP4F12Q9HCS2 524 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 ACSS2Q9NR19 701 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 ARHGEF3Q9NR81 526 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 THG1LQ9NWX6 298 aaKnown RBP11.78□□□□□ -0.52
TRIM40-205ENST00000307859 ELOVL2Q9NXB9 296 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 IL36AQ9UHA7 158 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 LNPEPQ9UIQ6 1025 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 TRMT6Q9UJA5 497 aaKnown RBP11.78□□□□□ -0.52
TRIM40-205ENST00000307859 SORCS3Q9UPU3 1222 aa11.78□□□□□ -0.52
TRIM40-205ENST00000307859 APOBEC2Q9Y235 224 aaKnown RBP11.78□□□□□ -0.52
TRIM40-205ENST00000307859 SPTBN4Q9H254 2564 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 A8MX80 341 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 UPK3BL1B0FP48 263 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 PRRT4C9JH25 899 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 UPK3BL2E5RIL1 263 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 H0YHG0 523 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 HDAC3O15379 428 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 SMIM24O75264 130 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 CTSLP07711 333 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 TPBGLP0DKB5 382 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 CYP2A6P11509 494 aaPredicted RBP11.77□□□□□ -0.53
TRIM40-205ENST00000307859 IMPDH1P20839 514 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 VIPR1P32241 457 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 SLC6A11P48066 632 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 SPINT3P49223 89 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 SEMG2Q02383 582 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 FCHO2Q0JRZ9 810 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 MESP2Q0VG99 397 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 TBCCQ15814 346 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 ARSIQ5FYB1 569 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 CFAP157Q5JU67 520 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 TANGO2Q6ICL3 276 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 FRMD7Q6ZUT3 714 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 NXPE1Q8N323 547 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 PHTF2Q8N3S3 785 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 SIDT2Q8NBJ9 832 aaKnown RBP11.77□□□□□ -0.53
TRIM40-205ENST00000307859 STAG3L4Q8TBR4 150 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 MAPK15Q8TD08 544 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 NXPE3Q969Y0 559 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 SLC7A6OSQ96CW6 309 aaPredicted RBP11.77□□□□□ -0.53
TRIM40-205ENST00000307859 PTCD3Q96EY7 689 aaKnown RBP11.77□□□□□ -0.53
TRIM40-205ENST00000307859 CCDC97Q96F63 343 aaPredicted RBP11.77□□□□□ -0.53
TRIM40-205ENST00000307859 PDLIM5Q96HC4 596 aaKnown RBP11.77□□□□□ -0.53
TRIM40-205ENST00000307859 RILPQ96NA2 401 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 TRMOQ9BU70 441 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 CLPBQ9H078 707 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 COG4Q9H9E3 785 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 ZFP14Q9HCL3 533 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 ARL8BQ9NVJ2 186 aa11.77□□□□□ -0.53
TRIM40-205ENST00000307859 FAM86C1Q9NVL1 165 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms