RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 RPA4Q13156 261 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 PUS10Q3MIT2 529 aaKnown RBP13.32□□□□□ -0.28
TRIM56-201ENST00000306085 TMED4Q7Z7H5 227 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 TMEM192Q8IY95 271 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 BORCS8Q96FH0 119 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 CIB1Q99828 191 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 SHROOM2Q13796 1616 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 H3BNX3 289 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 CHRM5P08912 532 aaPredicted RBP13.32□□□□□ -0.28
TRIM56-201ENST00000306085 RAB4BP61018 213 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 RNF220Q5VTB9 566 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 ZNF571Q7Z3V5 609 aaPredicted RBP13.32□□□□□ -0.28
TRIM56-201ENST00000306085 THAP5Q7Z6K1 395 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 FBXO16Q8IX29 292 aaPredicted RBP13.32□□□□□ -0.28
TRIM56-201ENST00000306085 PPM1MQ96MI6 270 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 ATP13A3Q9H7F0 1226 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 SQORQ9Y6N5 450 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 ALDH2P05091 517 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 SLC35G4P0C7Q5 338 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 MAP3K8P41279 467 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 FXR2P51116 673 aaKnown RBP eCLIP13.32□□□□□ -0.287e-7■■■■□ 22.9
TRIM56-201ENST00000306085 ECT2LQ008S8 904 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 GCNT6Q5T4J0 391 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 USP43Q70EL4 1123 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 PDPRQ8NCN5 879 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 TREX2Q9BQ50 279 aaPredicted RBP13.32□□□□□ -0.28
TRIM56-201ENST00000306085 SLC5A7Q9GZV3 580 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 DPP7Q9UHL4 492 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 SORCS3Q9UPU3 1222 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 ZNF823P16415 610 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 AHCYP23526 432 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 APLP1P51693 650 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 SLC39A3Q9BRY0 314 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 RGCCQ9H4X1 137 aa13.32□□□□□ -0.28
TRIM56-201ENST00000306085 IFT80Q9P2H3 777 aaPredicted RBP13.32□□□□□ -0.28
TRIM56-201ENST00000306085 FABP3P05413 133 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 FCGRTP55899 365 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 WSCD2Q2TBF2 565 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 TBC1D15Q8TC07 691 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 GTF3C2Q8WUA4 911 aaPredicted RBP13.31□□□□□ -0.28
TRIM56-201ENST00000306085 LENG9Q96B70 501 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.31□□□□□ -0.28
TRIM56-201ENST00000306085 TTC3P53804 2025 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 NDST1P52848 882 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 SREBF2Q12772 1141 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 HEXDCQ8WVB3 486 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 MKL1Q969V6 931 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 ARHGEF4Q9NR80 690 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 GULP1Q9UBP9 304 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 MAGEL2Q9UJ55 1249 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 PDPK1O15530 556 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 GPD2P43304 727 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 RAB10P61026 200 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 EGFL6Q8IUX8 553 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 OR7D4Q8NG98 312 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 BPIFB1Q8TDL5 484 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 OVCA2Q8WZ82 227 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 OR51V1Q9H2C8 321 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 OSER1Q9NX31 292 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 NPTX2P47972 431 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 FNTBP49356 437 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 FSCN1Q16658 493 aaKnown RBP13.31□□□□□ -0.28
TRIM56-201ENST00000306085 CCNYL2Q5T2Q4 361 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 LINGO1Q96FE5 620 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 VAT1Q99536 393 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 SLC22A4Q9H015 551 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 ALG2Q9H553 416 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 ANKRA2Q9H9E1 313 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 PLAGL2Q9UPG8 496 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 PCYT1BQ9Y5K3 369 aaPredicted RBP13.31□□□□□ -0.28
TRIM56-201ENST00000306085 NPEPPSL1A6NEC2 478 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 SLC2A2P11168 524 aaPredicted RBP13.31□□□□□ -0.28
TRIM56-201ENST00000306085 SEMA5AQ13591 1074 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 PTPAQ15257 358 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 NUP54Q7Z3B4 507 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 FAM129CQ86XR2 697 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 LYPLAL1Q5VWZ2 237 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 SLC22A15Q8IZD6 547 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 GJD3Q8N144 294 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 XAGE5Q8WWM1 108 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 OR6C6A6NF89 314 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 PRLRP16471 622 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 PTPN6P29350 595 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 CBX2Q14781 532 aaPredicted RBP13.31□□□□□ -0.28
TRIM56-201ENST00000306085 DCST1Q5T197 706 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 ANGEL2Q5VTE6 544 aaKnown RBP13.31□□□□□ -0.28
TRIM56-201ENST00000306085 ASB18Q6ZVZ8 466 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 ELOA2Q8IYF1 753 aaPredicted RBP13.31□□□□□ -0.28
TRIM56-201ENST00000306085 C2orf73Q8N5S3 287 aaPredicted RBP13.31□□□□□ -0.28
TRIM56-201ENST00000306085 SNIP1Q8TAD8 396 aaKnown RBP13.31□□□□□ -0.28
TRIM56-201ENST00000306085 MAPK12P53778 367 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 SLC39A12Q504Y0 691 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 PHTF2Q8N3S3 785 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 SMPDL3BQ92485 455 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 TBC1D14Q9P2M4 693 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 ZMYM2Q9UBW7 1377 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 LUMP51884 338 aaPredicted RBP13.31□□□□□ -0.28
TRIM56-201ENST00000306085 SIM2Q14190 667 aaPredicted RBP13.31□□□□□ -0.28
TRIM56-201ENST00000306085 LPCAT4Q643R3 524 aa13.31□□□□□ -0.28
TRIM56-201ENST00000306085 CHSY3Q70JA7 882 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms