RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 ANGPTL2Q9UKU9 493 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 CORO1CQ9ULV4 474 aaPredicted RBP9.2□□□□□ -0.94
PTPRE-202ENST00000306042 SIT1Q9Y3P8 196 aa9.2□□□□□ -0.94
PTPRE-202ENST00000306042 HS6ST1O60243 411 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 MTX2O75431 263 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 APBB3O95704 486 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 SEMA4FO95754 770 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 SEMA5AQ13591 1074 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 ELOCQ15369 112 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 ZNHIT3Q15649 155 aaPredicted RBP9.19□□□□□ -0.94
PTPRE-202ENST00000306042 TMPRSS11BQ86T26 416 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 SLC43A3Q8NBI5 491 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 XPR1Q9UBH6 696 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 CIDEBQ9UHD4 219 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 SCML1Q9UN30 329 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 MYO5AQ9Y4I1 1855 aaKnown RBP9.19□□□□□ -0.94
PTPRE-202ENST00000306042 NPEPPSL1A6NEC2 478 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 GDF10P55107 478 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 TOMM20Q15388 145 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 CHRNA6Q15825 494 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 SLC9A4Q6AI14 798 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 TANGO2Q6ICL3 276 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 HTR3DQ70Z44 454 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 OTULINQ96BN8 352 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 PSKH2Q96QS6 385 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 PEBP4Q96S96 227 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 DNAJC11Q9NVH1 559 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 THAP1Q9NVV9 213 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 E9PBE3 544 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 FAM72CH0Y354 149 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 NR5A2O00482 541 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 SIN3BO75182 1162 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 ATP6V1C1P21283 382 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 SERPINB5P36952 375 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 CCNFP41002 786 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 SSR2P43308 183 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 PXNP49023 591 aaPredicted RBP9.19□□□□□ -0.94
PTPRE-202ENST00000306042 SMAD4Q13485 552 aaKnown RBP9.19□□□□□ -0.94
PTPRE-202ENST00000306042 FUT11Q495W5 492 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 ATP13A5Q4VNC0 1218 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 SPDYCQ5MJ68 293 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 FAM72AQ5TYM5 149 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 KIAA0930Q6ICG6 404 aaPredicted RBP9.19□□□□□ -0.94
PTPRE-202ENST00000306042 FAM72DQ6L9T8 149 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 GPRIN3Q6ZVF9 776 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 FAM72BQ86X60 149 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 APCDD1Q8J025 514 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 ZNF248Q8NDW4 579 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 GPR156Q8NFN8 814 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 SLC22A18Q96BI1 424 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 HHIPQ96QV1 700 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 KLF16Q9BXK1 252 aaPredicted RBP9.19□□□□□ -0.94
PTPRE-202ENST00000306042 PHACTR1Q9C0D0 580 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 ATG10Q9H0Y0 220 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 CAB39LQ9H9S4 337 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 METTL18O95568 372 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 NUDT14O95848 222 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 LAMP2P13473 410 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 EEF1DP29692 281 aaKnown RBP9.19□□□□□ -0.94
PTPRE-202ENST00000306042 GALK1P51570 392 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 CLCNKAP51800 687 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 NFYCQ13952 458 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 Q6ZVL8 140 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 CMC1Q7Z7K0 106 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 UBALD2Q8IYN6 164 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 CDYL2Q8N8U2 506 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 ZFP28Q8NHY6 868 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 ERP27Q96DN0 273 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 CCDC138Q96M89 665 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 SH3GL1Q99961 368 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 EPN3Q9H201 632 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 ATAD3AQ9NVI7 634 aa9.19□□□□□ -0.94
PTPRE-202ENST00000306042 STX18Q9P2W9 335 aaKnown RBP9.19□□□□□ -0.94
PTPRE-202ENST00000306042 FAF1Q9UNN5 650 aaPredicted RBP9.19□□□□□ -0.94
PTPRE-202ENST00000306042 PTPRZ1P23471 2315 aaPredicted RBP9.18□□□□□ -0.94
PTPRE-202ENST00000306042 CCDC162PA2VCL2 907 aa9.18□□□□□ -0.94
PTPRE-202ENST00000306042 KMOO15229 486 aa9.18□□□□□ -0.94
PTPRE-202ENST00000306042 AKAP10O43572 662 aa9.18□□□□□ -0.94
PTPRE-202ENST00000306042 STK16O75716 305 aa9.18□□□□□ -0.94
PTPRE-202ENST00000306042 PGM1P36871 562 aa9.18□□□□□ -0.94
PTPRE-202ENST00000306042 SOX9P48436 509 aa9.18□□□□□ -0.94
PTPRE-202ENST00000306042 CYP4F2P78329 520 aa9.18□□□□□ -0.94
PTPRE-202ENST00000306042 MPP1Q00013 466 aa9.18□□□□□ -0.94
PTPRE-202ENST00000306042 ARHGAP36Q6ZRI8 547 aa9.18□□□□□ -0.94
PTPRE-202ENST00000306042 SRFBP1Q8NEF9 429 aaKnown RBP9.18□□□□□ -0.94
PTPRE-202ENST00000306042 SLC35B2Q8TB61 432 aa9.18□□□□□ -0.94
PTPRE-202ENST00000306042 USP7Q93009 1102 aa9.18□□□□□ -0.94
PTPRE-202ENST00000306042 AZIN2Q96A70 460 aa9.18□□□□□ -0.94
PTPRE-202ENST00000306042 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.18□□□□□ -0.94
PTPRE-202ENST00000306042 RXFP1Q9HBX9 757 aa9.18□□□□□ -0.94
PTPRE-202ENST00000306042 TCF7L2Q9NQB0 619 aa9.18□□□□□ -0.94
PTPRE-202ENST00000306042 INTS10Q9NVR2 710 aaKnown RBP9.18□□□□□ -0.94
PTPRE-202ENST00000306042 KLHL28Q9NXS3 571 aa9.18□□□□□ -0.94
PTPRE-202ENST00000306042 MID1O15344 667 aa9.18□□□□□ -0.94
PTPRE-202ENST00000306042 HNRNPCL1O60812 293 aaKnown RBP9.18□□□□□ -0.94
PTPRE-202ENST00000306042 POP7O75817 140 aaKnown RBP9.18□□□□□ -0.94
PTPRE-202ENST00000306042 SLC35G6P0C7Q6 338 aa9.18□□□□□ -0.94
PTPRE-202ENST00000306042 ATP6V1E1P36543 226 aa9.18□□□□□ -0.94
PTPRE-202ENST00000306042 TMEM31Q5JXX7 168 aa9.18□□□□□ -0.94
PTPRE-202ENST00000306042 ANKRD22Q5VYY1 191 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms