RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 AVPR1AP37288 418 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 MAGEA11P43364 429 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 GRIA4P48058 902 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 ARHGAP15Q53QZ3 475 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 CCNYL2Q5T2Q4 361 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 RNF135Q8IUD6 432 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 CNTD1Q8N815 330 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 NIPA2Q8N8Q9 360 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 TMEM102Q8N9M5 508 aaPredicted RBP10.84□□□□□ -0.67
LSM3-201ENST00000306024 OR7G1Q8NGA0 311 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 OR2T34Q8NGX1 318 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 OR2T3Q8NH03 318 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 VPS33AQ96AX1 596 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 ZNF486Q96H40 463 aaPredicted RBP10.84□□□□□ -0.67
LSM3-201ENST00000306024 CDK5RAP1Q96SZ6 601 aaKnown RBP10.84□□□□□ -0.67
LSM3-201ENST00000306024 GATA5Q9BWX5 397 aaPredicted RBP10.84□□□□□ -0.67
LSM3-201ENST00000306024 PNPLA8Q9NP80 782 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 RPRD1BQ9NQG5 326 aaKnown RBP10.84□□□□□ -0.67
LSM3-201ENST00000306024 ASAH2Q9NR71 780 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 SMPD3Q9NY59 655 aaPredicted RBP10.84□□□□□ -0.67
LSM3-201ENST00000306024 VANGL2Q9ULK5 521 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 OAZ3Q9UMX2 235 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 PCDHA11Q9Y5I1 949 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 ORC6Q9Y5N6 252 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 BACE2Q9Y5Z0 518 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 H0YJX3 145 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 CCL16O15467 120 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 H2AFYO75367 372 aaKnown RBP10.84□□□□□ -0.67
LSM3-201ENST00000306024 TFEBP19484 476 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 MGAT1P26572 445 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 GMPRP36959 345 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 TMTC4Q5T4D3 741 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 IL31Q6EBC2 164 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 PRR23CQ6ZRP0 262 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 TFAP2DQ7Z6R9 452 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 HORMAD1Q86X24 394 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 SPPL2CQ8IUH8 684 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 ALPK1Q96QP1 1244 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 WDR83Q9BRX9 315 aaKnown RBP10.84□□□□□ -0.67
LSM3-201ENST00000306024 CWH43Q9H720 699 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 TLR9Q9NR96 1032 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 SNX15Q9NRS6 342 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 VTI1BQ9UEU0 232 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 DNMT3LQ9UJW3 386 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 NR5A2O00482 541 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 INPPL1O15357 1258 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 TBX1O43435 398 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 XYLBO75191 536 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 C8BP07358 591 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 DDX5P17844 614 aaKnown RBP10.84□□□□□ -0.67
LSM3-201ENST00000306024 CAPGP40121 348 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 CLCQ05315 142 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 SLC13A2Q13183 592 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 HERC3Q15034 1050 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 ZFP69Q49AA0 526 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 AASDHQ4L235 1098 aaPredicted RBP10.84□□□□□ -0.67
LSM3-201ENST00000306024 PID1Q7Z2X4 250 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 DNAJB7Q7Z6W7 309 aaPredicted RBP10.84□□□□□ -0.67
LSM3-201ENST00000306024 STK32CQ86UX6 486 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 LRRC49Q8IUZ0 686 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 PYROXD2Q8N2H3 581 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 MAPK15Q8TD08 544 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 BCL7CQ8WUZ0 217 aaPredicted RBP10.84□□□□□ -0.67
LSM3-201ENST00000306024 CELF6Q96J87 481 aaKnown RBP10.84□□□□□ -0.67
LSM3-201ENST00000306024 RNF157Q96PX1 679 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 PIGVQ9NUD9 493 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 ANKMY1Q9P2S6 941 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 B3GNT3Q9Y2A9 372 aa10.84□□□□□ -0.67
LSM3-201ENST00000306024 F5H5T6 163 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 M0QX08 132 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 FCGR1AP12314 374 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 ITIH1P19827 911 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 ADSLP30566 484 aaPredicted RBP10.83□□□□□ -0.68
LSM3-201ENST00000306024 TMBIM6P55061 237 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 ARL13AQ5H913 290 aaPredicted RBP10.83□□□□□ -0.68
LSM3-201ENST00000306024 CES4AQ5XG92 561 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 DSG4Q86SJ6 1040 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 NETO2Q8NC67 525 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 FIG4Q92562 907 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 RORBQ92753 470 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 DMRTB1Q96MA1 342 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 APOL5Q9BWW9 433 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 PIF1Q9H611 641 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 RIC8BQ9NVN3 520 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 PER2O15055 1255 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 CRYZL1O95825 349 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 UGT2B4P06133 528 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 CNPP09543 421 aaKnown RBP10.83□□□□□ -0.68
LSM3-201ENST00000306024 GNG2P59768 71 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 ZNF252P-AS1Q0IIN9 211 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 LRP8Q14114 963 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 SKIV2LQ15477 1246 aaKnown RBP10.83□□□□□ -0.68
LSM3-201ENST00000306024 CA9Q16790 459 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 RAB6CQ53S08 254 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 CYP4V2Q6ZWL3 525 aaPredicted RBP10.83□□□□□ -0.68
LSM3-201ENST00000306024 MPP5Q8N3R9 675 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 ASPSCR1Q9BZE9 553 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 RAB6CQ9H0N0 254 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 RMND5AQ9H871 391 aa10.83□□□□□ -0.68
LSM3-201ENST00000306024 SP110Q9HB58 689 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms