RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 KMOO15229 486 aa26.12■■□□□ 1.77
CDKN2A-201ENST00000304494 PPM1DO15297 605 aa26.12■■□□□ 1.77
CDKN2A-201ENST00000304494 ITPKBP27987 946 aa26.12■■□□□ 1.77
CDKN2A-201ENST00000304494 ATP13A5Q4VNC0 1218 aa26.12■■□□□ 1.77
CDKN2A-201ENST00000304494 ZNF648Q5T619 568 aaPredicted RBP26.12■■□□□ 1.77
CDKN2A-201ENST00000304494 SLITRK4Q8IW52 837 aa26.12■■□□□ 1.77
CDKN2A-201ENST00000304494 CCDC112Q8NEF3 446 aa26.12■■□□□ 1.77
CDKN2A-201ENST00000304494 SLC37A2Q8TED4 501 aa26.12■■□□□ 1.77
CDKN2A-201ENST00000304494 ITPR1Q14643 2758 aa26.12■■□□□ 1.77
CDKN2A-201ENST00000304494 CDRT15L2A8MXV6 281 aa26.11■■□□□ 1.77
CDKN2A-201ENST00000304494 ARHGAP6O43182 974 aa26.11■■□□□ 1.77
CDKN2A-201ENST00000304494 CDK14O94921 469 aa26.11■■□□□ 1.77
CDKN2A-201ENST00000304494 CLCNKAP51800 687 aa26.11■■□□□ 1.77
CDKN2A-201ENST00000304494 KLF1Q13351 362 aaPredicted RBP26.11■■□□□ 1.77
CDKN2A-201ENST00000304494 IYDQ6PHW0 289 aa26.11■■□□□ 1.77
CDKN2A-201ENST00000304494 RANBP10Q6VN20 620 aa26.11■■□□□ 1.77
CDKN2A-201ENST00000304494 PDZD3Q86UT5 571 aa26.11■■□□□ 1.77
CDKN2A-201ENST00000304494 LRRTM4Q86VH4 590 aa26.11■■□□□ 1.77
CDKN2A-201ENST00000304494 GDAP1Q8TB36 358 aa26.11■■□□□ 1.77
CDKN2A-201ENST00000304494 CCDC110Q8TBZ0 833 aa26.11■■□□□ 1.77
CDKN2A-201ENST00000304494 BRSK1Q8TDC3 778 aa26.11■■□□□ 1.77
CDKN2A-201ENST00000304494 CCDC97Q96F63 343 aaPredicted RBP26.11■■□□□ 1.77
CDKN2A-201ENST00000304494 RDH14Q9HBH5 336 aa26.11■■□□□ 1.77
CDKN2A-201ENST00000304494 KCNK4Q9NYG8 393 aa26.11■■□□□ 1.77
CDKN2A-201ENST00000304494 RALYQ9UKM9 306 aaKnown RBP26.11■■□□□ 1.77
CDKN2A-201ENST00000304494 SCN8AQ9UQD0 1980 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 TRBV23OR9-2A0A075B6M9 112 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 KIR2DS5A0A0G2JLQ3 304 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 A0A0G2JNG1 304 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 GLYATL1P3A0A0U1RQE8 302 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 PMS2P1A4D2B8 440 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 C5orf60A6NFR6 353 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 OR5K4A6NMS3 321 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 C2orf81A6NN90 581 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 KIR2DS3K7RE56 304 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 SNX2O60749 519 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 EML2O95834 649 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 JMJD7P0C870 316 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 F3P13726 295 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 CD1CP29017 333 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 ADRA1AP35348 466 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 UGT1A5P35504 534 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 GPLD1P80108 840 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 HHEXQ03014 270 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 ITGA9Q13797 1035 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 GTF2H3Q13889 308 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 KIR2DS5Q14953 304 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 INSCQ1MX18 579 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 PHF19Q5T6S3 580 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 CRTC3Q6UUV7 619 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 TMPRSS9Q7Z410 1059 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 CLEC14AQ86T13 490 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 SLC9B2Q86UD5 537 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 AVL9Q8NBF6 648 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 KCNE4Q8WWG9 221 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 SH3KBP1Q96B97 665 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 TTC25Q96NG3 672 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 SLC38A3Q99624 504 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 CMKLR1Q99788 373 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 DPYSL5Q9BPU6 564 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 ZCCHC2Q9C0B9 1178 aaKnown RBP26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 SARS2Q9NP81 518 aaKnown RBP26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 KLC4Q9NSK0 619 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 AKAP7Q9P0M2 348 aaPredicted RBP26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 GUCA1BQ9UMX6 200 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 LOXL2Q9Y4K0 774 aa26.1■■□□□ 1.77
CDKN2A-201ENST00000304494 IGHV1OR21-1A0A087WYE8 117 aa26.09■■□□□ 1.77
CDKN2A-201ENST00000304494 A6NCN8 305 aa26.09■■□□□ 1.77
CDKN2A-201ENST00000304494 STX7O15400 261 aaKnown RBP26.09■■□□□ 1.77
CDKN2A-201ENST00000304494 MTX2O75431 263 aa26.09■■□□□ 1.77
CDKN2A-201ENST00000304494 SQSTM1Q13501 440 aa26.09■■□□□ 1.77
CDKN2A-201ENST00000304494 TAF1AQ15573 450 aaPredicted RBP26.09■■□□□ 1.77
CDKN2A-201ENST00000304494 CHCHD2P9Q5T1J5 151 aaPredicted RBP26.09■■□□□ 1.77
CDKN2A-201ENST00000304494 FAM151BQ6UXP7 276 aa26.09■■□□□ 1.77
CDKN2A-201ENST00000304494 ARHGEF18Q6ZSZ5 1173 aa26.09■■□□□ 1.77
CDKN2A-201ENST00000304494 USP53Q70EK8 1073 aa26.09■■□□□ 1.77
CDKN2A-201ENST00000304494 SPACA3Q8IXA5 215 aa26.09■■□□□ 1.77
CDKN2A-201ENST00000304494 NAF1Q96HR8 494 aaKnown RBP26.09■■□□□ 1.77
CDKN2A-201ENST00000304494 TIMM29Q9BSF4 260 aa26.09■■□□□ 1.77
CDKN2A-201ENST00000304494 DPH1Q9BZG8 443 aa26.09■■□□□ 1.77
CDKN2A-201ENST00000304494 SEMA6CQ9H3T2 930 aa26.09■■□□□ 1.77
CDKN2A-201ENST00000304494 OSGEPL1Q9H4B0 414 aa26.09■■□□□ 1.77
CDKN2A-201ENST00000304494 TMPRSS11EQ9UL52 423 aa26.09■■□□□ 1.77
CDKN2A-201ENST00000304494 NBEAQ8NFP9 2946 aa26.08■■□□□ 1.77
CDKN2A-201ENST00000304494 LPOP22079 712 aaPredicted RBP26.08■■□□□ 1.77
CDKN2A-201ENST00000304494 PDE1BQ01064 536 aa26.08■■□□□ 1.77
CDKN2A-201ENST00000304494 TLE3Q04726 772 aa26.08■■□□□ 1.77
CDKN2A-201ENST00000304494 TMEM115Q12893 351 aaPredicted RBP26.08■■□□□ 1.77
CDKN2A-201ENST00000304494 CHRNA6Q15825 494 aa26.08■■□□□ 1.77
CDKN2A-201ENST00000304494 LDLRAP1Q5SW96 308 aa26.08■■□□□ 1.77
CDKN2A-201ENST00000304494 SEL1L2Q5TEA6 688 aa26.08■■□□□ 1.77
CDKN2A-201ENST00000304494 BROXQ5VW32 411 aa26.08■■□□□ 1.77
CDKN2A-201ENST00000304494 FAM71DQ8N9W8 422 aa26.08■■□□□ 1.77
CDKN2A-201ENST00000304494 OR10G6Q8NH81 332 aa26.08■■□□□ 1.77
CDKN2A-201ENST00000304494 AHCYL2Q96HN2 611 aaKnown RBP26.08■■□□□ 1.77
CDKN2A-201ENST00000304494 APOL2Q9BQE5 337 aa26.08■■□□□ 1.77
CDKN2A-201ENST00000304494 NUDT22Q9BRQ3 303 aa26.08■■□□□ 1.77
CDKN2A-201ENST00000304494 FEZ2Q9UHY8 353 aaPredicted RBP26.08■■□□□ 1.77
CDKN2A-201ENST00000304494 PCDHGA7Q9Y5G6 932 aa26.08■■□□□ 1.77
CDKN2A-201ENST00000304494 ARL5AQ9Y689 179 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms