RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 ITPKAP23677 461 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 PTX3P26022 381 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-201ENST00000302528 BST1Q10588 318 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 SEMA5AQ13591 1074 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 ACVR2BQ13705 512 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 C15orf59Q2T9L4 293 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-201ENST00000302528 OR4L1Q8NH43 312 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 RFKQ969G6 155 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 NXPE2Q96DL1 559 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 ADARB2Q9NS39 739 aaKnown RBP10.33□□□□□ -0.76
CLIP1-201ENST00000302528 RDH8Q9NYR8 311 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 ATXN10Q9UBB4 475 aa10.33□□□□□ -0.76
CLIP1-201ENST00000302528 AGO1Q9UL18 857 aaKnown RBP10.33□□□□□ -0.76
CLIP1-201ENST00000302528 PRPF19Q9UMS4 504 aaKnown RBP10.33□□□□□ -0.76
CLIP1-201ENST00000302528 SETD1BQ9UPS6 1966 aaKnown RBP10.33□□□□□ -0.76
CLIP1-201ENST00000302528 M0R036 132 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 FABP3P05413 133 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 SERPINA6P08185 405 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 IL12BP29460 328 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 PSEN1P49768 467 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 AADACL4Q5VUY2 407 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 ADGRG6Q86SQ4 1221 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 SLITRK4Q8IW52 837 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 MPP5Q8N3R9 675 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 INO80EQ8NBZ0 244 aaPredicted RBP10.32□□□□□ -0.76
CLIP1-201ENST00000302528 PIGXQ8TBF5 258 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 HEXDCQ8WVB3 486 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 SPATC1LQ9H0A9 340 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 TOR3AQ9H497 397 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 SMURF1Q9HCE7 757 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 HMX1Q9NP08 348 aaPredicted RBP10.32□□□□□ -0.76
CLIP1-201ENST00000302528 BBIP1A8MTZ0 92 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 LINGO3P0C6S8 592 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 RBM34P42696 430 aaKnown RBP10.32□□□□□ -0.76
CLIP1-201ENST00000302528 PRKCDQ05655 676 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 SLC25A25Q6KCM7 469 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 ANKRD26P1Q6NSI1 321 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 ZPBP2Q6X784 338 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 SLC22A15Q8IZD6 547 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 LSM14AQ8ND56 463 aaKnown RBP10.32□□□□□ -0.76
CLIP1-201ENST00000302528 OR2L2Q8NH16 312 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 PCDH19Q8TAB3 1148 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 CEP76Q8TAP6 659 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 TRAPPC12Q8WVT3 735 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 SMPDL3BQ92485 455 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 TRIM43Q96BQ3 446 aaPredicted RBP10.32□□□□□ -0.76
CLIP1-201ENST00000302528 ZNF490Q9ULM2 529 aaPredicted RBP10.32□□□□□ -0.76
CLIP1-201ENST00000302528 PDHXO00330 501 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 SCNN1GP51170 649 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 CAV3P56539 151 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 ELP6Q0PNE2 266 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 DPYSQ14117 519 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 PGM5Q15124 567 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 LDLRAP1Q5SW96 308 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 CMTR2Q8IYT2 770 aaKnown RBP10.32□□□□□ -0.76
CLIP1-201ENST00000302528 GJD3Q8N144 294 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 C2orf73Q8N5S3 287 aaPredicted RBP10.32□□□□□ -0.76
CLIP1-201ENST00000302528 HCAR2Q8TDS4 363 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 LMLNQ96KR4 655 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 APOLD1Q96LR9 279 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 GORASP1Q9BQQ3 440 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 PHPT1Q9NRX4 125 aaPredicted RBP10.32□□□□□ -0.76
CLIP1-201ENST00000302528 KBTBD4Q9NVX7 518 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 HMGXB4Q9UGU5 601 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 GNB5O14775 395 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 IFNW1P05000 195 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 AHCYP23526 432 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 PITPNAQ00169 270 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 CHAF1BQ13112 559 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 RIN1Q13671 783 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 PUM1Q14671 1186 aaKnown RBP eCLIP10.32□□□□□ -0.765e-6■□□□□ 10.2
CLIP1-201ENST00000302528 CDKL4Q5MAI5 379 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 WSCD1Q658N2 575 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 FAM35AQ86V20 835 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 TMEM17Q86X19 198 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 GHDCQ8N2G8 530 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 SDR16C5Q8N3Y7 309 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 LNX2Q8N448 690 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 ACMSDQ8TDX5 336 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 UROC1Q96N76 676 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 HOPXQ9BPY8 73 aaPredicted RBP10.32□□□□□ -0.76
CLIP1-201ENST00000302528 RNF208Q9H0X6 261 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 NOL11Q9H8H0 719 aaKnown RBP10.32□□□□□ -0.76
CLIP1-201ENST00000302528 TBC1D17Q9HA65 648 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 TAS2R7Q9NYW3 318 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 ERVK-11Q9UQG0 969 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 MAP4K5Q9Y4K4 846 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 FPGTO14772 594 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 RECQL4O94761 1208 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 SCGB1D2O95969 90 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 ZNF20P17024 532 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 GRK6P43250 576 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 MAN2A2P49641 1150 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 NDUFV1P49821 464 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 MAXP61244 160 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 CTBP1Q13363 440 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 ARFRP1Q13795 201 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 COLEC12Q5KU26 742 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 ANO7Q6IWH7 933 aa10.32□□□□□ -0.76
CLIP1-201ENST00000302528 ZNF627Q7L945 461 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms