RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 CHRNA6Q15825 494 aa11.11□□□□□ -0.63
CLCC1-201ENST00000302500 ZNF569Q5MCW4 686 aa11.11□□□□□ -0.63
CLCC1-201ENST00000302500 ALS2CLQ60I27 953 aa11.11□□□□□ -0.63
CLCC1-201ENST00000302500 IYDQ6PHW0 289 aa11.11□□□□□ -0.63
CLCC1-201ENST00000302500 MARK2Q7KZI7 788 aaKnown RBP11.11□□□□□ -0.63
CLCC1-201ENST00000302500 SLC13A5Q86YT5 568 aaPredicted RBP11.11□□□□□ -0.63
CLCC1-201ENST00000302500 SLC25A41Q8N5S1 370 aa11.11□□□□□ -0.63
CLCC1-201ENST00000302500 SCG3Q8WXD2 468 aaKnown RBP11.11□□□□□ -0.63
CLCC1-201ENST00000302500 APOL2Q9BQE5 337 aa11.11□□□□□ -0.63
CLCC1-201ENST00000302500 NUDT22Q9BRQ3 303 aa11.11□□□□□ -0.63
CLCC1-201ENST00000302500 TMEM121Q9BTD3 319 aa11.11□□□□□ -0.63
CLCC1-201ENST00000302500 FICDQ9BVA6 458 aa11.11□□□□□ -0.63
CLCC1-201ENST00000302500 KCNF1Q9H3M0 494 aa11.11□□□□□ -0.63
CLCC1-201ENST00000302500 DPEP2Q9H4A9 486 aa11.11□□□□□ -0.63
CLCC1-201ENST00000302500 OGFRQ9NZT2 677 aa11.11□□□□□ -0.63
CLCC1-201ENST00000302500 MROH6A6NGR9 719 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 GRID2O43424 1007 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 BUD23O43709 281 aaKnown RBP11.1□□□□□ -0.63
CLCC1-201ENST00000302500 VEGFDO43915 354 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 UGT1A9O60656 530 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 PPFIA2O75334 1257 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 ANXA9O76027 345 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 SUN1O94901 812 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 AP2A1O95782 977 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 HOXB3P14651 431 aaPredicted RBP11.1□□□□□ -0.63
CLCC1-201ENST00000302500 UGT1A6P19224 532 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 UGT1A1P22309 533 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 UGT1A4P22310 534 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 ITPKBP27987 946 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 UGT1A3P35503 534 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 UGT1A5P35504 534 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 SPAM1P38567 509 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 GEMP55040 296 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 OR1D5P58170 312 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 GABREP78334 506 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 SPIDRQ14159 915 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 C16orf72Q14CZ0 275 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 TAF1AQ15573 450 aaPredicted RBP11.1□□□□□ -0.63
CLCC1-201ENST00000302500 CLPPQ16740 277 aaPredicted RBP11.1□□□□□ -0.63
CLCC1-201ENST00000302500 PARP6Q2NL67 630 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 ODF2Q5BJF6 829 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 ITPRIPL1Q6GPH6 555 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 DRICH1Q6PGQ1 229 aaPredicted RBP11.1□□□□□ -0.63
CLCC1-201ENST00000302500 ABRAXAS1Q6UWZ7 409 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 WASH2PQ6VEQ5 465 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 GALNT13Q8IUC8 556 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 PHYKPLQ8IUZ5 450 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 REXO1L1PQ8IX06 675 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 UBL4BQ8N7F7 174 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 PAF1Q8N7H5 531 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 RASGEF1AQ8N9B8 481 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 FAM71DQ8N9W8 422 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 TTC13Q8NBP0 860 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 OR13C4Q8NGS5 318 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 BRSK1Q8TDC3 778 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 SNRNP27Q8WVK2 155 aaKnown RBP11.1□□□□□ -0.63
CLCC1-201ENST00000302500 PDLIM2Q96JY6 352 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 ZNF578Q96N58 590 aaPredicted RBP11.1□□□□□ -0.63
CLCC1-201ENST00000302500 TIMM29Q9BSF4 260 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 SPATA16Q9BXB7 569 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 GPR63Q9BZJ6 419 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 TSGA10Q9BZW7 698 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 OR2AG1Q9H205 316 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 SEMA6CQ9H3T2 930 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 UGT1A7Q9HAW7 530 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 UGT1A10Q9HAW8 530 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 UGT1A8Q9HAW9 530 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 SARS2Q9NP81 518 aaKnown RBP11.1□□□□□ -0.63
CLCC1-201ENST00000302500 WASH6PQ9NQA3 447 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 RAD18Q9NS91 495 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 EVA1BQ9NVM1 165 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 TMEM9Q9P0T7 183 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 ZNF624Q9P2J8 865 aaPredicted RBP11.1□□□□□ -0.63
CLCC1-201ENST00000302500 RALYQ9UKM9 306 aaKnown RBP11.1□□□□□ -0.63
CLCC1-201ENST00000302500 ATXN7L1Q9ULK2 861 aaPredicted RBP11.1□□□□□ -0.63
CLCC1-201ENST00000302500 GUCA1BQ9UMX6 200 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 KCNK6Q9Y257 313 aa11.1□□□□□ -0.63
CLCC1-201ENST00000302500 AAR2Q9Y312 384 aaKnown RBP11.1□□□□□ -0.63
CLCC1-201ENST00000302500 IGHV5-10-1A0A0J9YXX1 117 aa11.09□□□□□ -0.63
CLCC1-201ENST00000302500 GOLGA6CA6NDK9 693 aa11.09□□□□□ -0.63
CLCC1-201ENST00000302500 GOLGA6BA6NDN3 693 aa11.09□□□□□ -0.63
CLCC1-201ENST00000302500 KRT86O43790 486 aa11.09□□□□□ -0.63
CLCC1-201ENST00000302500 SLC25A14O95258 325 aaPredicted RBP11.09□□□□□ -0.63
CLCC1-201ENST00000302500 GOLGA6DP0CG33 693 aa11.09□□□□□ -0.63
CLCC1-201ENST00000302500 THRAP10827 490 aa11.09□□□□□ -0.63
CLCC1-201ENST00000302500 ACP5P13686 325 aa11.09□□□□□ -0.63
CLCC1-201ENST00000302500 F3P13726 295 aa11.09□□□□□ -0.63
CLCC1-201ENST00000302500 ETV5P41161 510 aa11.09□□□□□ -0.63
CLCC1-201ENST00000302500 MLLT3P42568 568 aaPredicted RBP11.09□□□□□ -0.63
CLCC1-201ENST00000302500 NAP1L1P55209 391 aaKnown RBP11.09□□□□□ -0.63
CLCC1-201ENST00000302500 TLE3Q04726 772 aa11.09□□□□□ -0.63
CLCC1-201ENST00000302500 TMEM115Q12893 351 aaPredicted RBP11.09□□□□□ -0.63
CLCC1-201ENST00000302500 SPARCL1Q14515 664 aa11.09□□□□□ -0.63
CLCC1-201ENST00000302500 P3H1Q32P28 736 aa11.09□□□□□ -0.63
CLCC1-201ENST00000302500 GPRC6AQ5T6X5 926 aa11.09□□□□□ -0.63
CLCC1-201ENST00000302500 AGAP9Q5VTM2 703 aa11.09□□□□□ -0.63
CLCC1-201ENST00000302500 DARS2Q6PI48 645 aaKnown RBP11.09□□□□□ -0.63
CLCC1-201ENST00000302500 PCSK4Q6UW60 755 aa11.09□□□□□ -0.63
CLCC1-201ENST00000302500 FAM83HQ6ZRV2 1179 aaPredicted RBP11.09□□□□□ -0.63
CLCC1-201ENST00000302500 CHST15Q7LFX5 561 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms