RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 PNPT1Q8TCS8 783 aaKnown RBP14.56□□□□□ -0.08
COL6A2-201ENST00000300527 ITGB1BP2Q9UKP3 347 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 BPTFQ12830 3046 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 SMIM28A0A1B0GU29 152 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 A0A1W2PP18 115 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 TRPC1P48995 793 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 COLEC12Q5KU26 742 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 RBM23Q86U06 439 aaKnown RBP14.56□□□□□ -0.08
COL6A2-201ENST00000300527 TAC4Q86UU9 113 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 SYTL1Q8IYJ3 562 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 DTWD1Q8N5C7 304 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 CHDHQ8NE62 594 aaPredicted RBP14.56□□□□□ -0.08
COL6A2-201ENST00000300527 MCOLN3Q8TDD5 553 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 SLX1AQ9BQ83 275 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 RIBC2Q9H4K1 309 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 GPN2Q9H9Y4 310 aaPredicted RBP14.56□□□□□ -0.08
COL6A2-201ENST00000300527 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.56□□□□□ -0.08
COL6A2-201ENST00000300527 ERVK-18Q9QC07 812 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 UBQLN1Q9UMX0 589 aaKnown RBP14.56□□□□□ -0.08
COL6A2-201ENST00000300527 TCRBV5S2A0A599 114 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 MYBPHLA2RUH7 354 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 SELENBP1Q13228 472 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 TTLL4Q14679 1199 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 GTF2IRD2BQ6EKJ0 949 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 LBX2Q6XYB7 198 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 GTF2IRD2Q86UP8 949 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 CCDC103Q8IW40 242 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 COLGALT2Q8IYK4 626 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 FBXO39Q8N4B4 442 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 MTMR14Q8NCE2 650 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 FAM162AQ96A26 154 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 PRM3Q9NNZ6 103 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 TLR9Q9NR96 1032 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 DDX28Q9NUL7 540 aaKnown RBP14.56□□□□□ -0.08
COL6A2-201ENST00000300527 FAM118AQ9NWS6 357 aa14.56□□□□□ -0.08
COL6A2-201ENST00000300527 LINC00854A0A1B0GVQ3 168 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 SNPHO15079 494 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 PSMD3O43242 534 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 KRT75O95678 551 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 HTR1AP08908 422 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 GSTM2P28161 218 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 DAOAP59103 153 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 DPY19L1Q2PZI1 675 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 DEPDC1Q5TB30 811 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 TTC23Q5W5X9 447 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 KIAA0930Q6ICG6 404 aaPredicted RBP14.55□□□□□ -0.08
COL6A2-201ENST00000300527 USP51Q70EK9 711 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 FAM126BQ8IXS8 530 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 LRRC52Q8N7C0 313 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 MRGPRX2Q96LB1 330 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 ZNF560Q96MR9 790 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 RHNO1Q9BSD3 238 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 NTN4Q9HB63 628 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 GMIPQ9P107 970 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 LEF1Q9UJU2 399 aaPredicted RBP14.55□□□□□ -0.08
COL6A2-201ENST00000300527 ASPDHA6ND91 283 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 MITFO75030 526 aaPredicted RBP14.55□□□□□ -0.08
COL6A2-201ENST00000300527 KATNA1O75449 491 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 UGT2B4P06133 528 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 CSRP3P50461 194 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 GTF2H3Q13889 308 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 TRIP4Q15650 581 aaPredicted RBP14.55□□□□□ -0.08
COL6A2-201ENST00000300527 DGUOKQ16854 277 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 CATSPEREQ5SY80 951 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 SLC16A12Q6ZSM3 486 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 BNIPLQ7Z465 357 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 MICU2Q8IYU8 434 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 CALML6Q8TD86 181 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 ZFP42Q96MM3 310 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 MYOCQ99972 504 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 TRIM54Q9BYV2 358 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 ENTPD7Q9NQZ7 604 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 SDR39U1Q9NRG7 319 aaPredicted RBP14.55□□□□□ -0.08
COL6A2-201ENST00000300527 NOX1Q9Y5S8 564 aa14.55□□□□□ -0.08
COL6A2-201ENST00000300527 ASB14A6NK59 587 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 ZNF99A8MXY4 864 aaPredicted RBP14.54□□□□□ -0.08
COL6A2-201ENST00000300527 GP2P55259 537 aaKnown RBP14.54□□□□□ -0.08
COL6A2-201ENST00000300527 SNX17Q15036 470 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 ADPRMQ3LIE5 342 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 PLEKHG7Q6ZR37 379 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 PAQR9Q6ZVX9 377 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 MILR1Q7Z6M3 343 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 AKAP14Q86UN6 197 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 CNTN4Q8IWV2 1026 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 TRMOQ9BU70 441 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 AMBRA1Q9C0C7 1298 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 TMEM30AQ9NV96 361 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 ENPP5Q9UJA9 477 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 B3GNT3Q9Y2A9 372 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 MYO1GB0I1T2 1018 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 CHEK2O96017 543 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 ALPLP05186 524 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 ANXA6P08133 673 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 GTF2E2P29084 291 aaKnown RBP14.54□□□□□ -0.08
COL6A2-201ENST00000300527 SERPINB10P48595 397 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 SERPINH1P50454 418 aaKnown RBP14.54□□□□□ -0.08
COL6A2-201ENST00000300527 COPZ1P61923 177 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 DSC2Q02487 901 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 KYAT1Q16773 422 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 RSBN1Q5VWQ0 802 aaPredicted RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms