RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 SULT1C3Q6IMI6 304 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 STX12Q86Y82 276 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CROCCP3Q8IVE0 287 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 KCT2Q8NC54 265 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 NKD1Q969G9 470 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 BCL9O00512 1426 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 FSCN2O14926 492 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 RYKP34925 604 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 NR1H2P55055 460 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ATP6V0D1P61421 351 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 GRM3Q14832 879 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CAPN13Q6MZZ7 669 aaPredicted RBP13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ADGRG6Q86SQ4 1221 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 AADATQ8N5Z0 425 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 OR7D4Q8NG98 312 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ADAMTS15Q8TE58 950 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 NEUROD4Q9HD90 331 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PMF1-BGLAPU3KQ54 211 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 RIC1Q4ADV7 1423 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 BTNL10A8MVZ5 291 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ALOX15BO15296 676 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 C2P06681 752 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 IGFBP5P24593 272 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SMIM11AP58511 58 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SLC30A6Q6NXT4 461 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 OAFQ86UD1 273 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SLC17A6Q9P2U8 582 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 FRMPD1Q5SYB0 1578 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 VWDEQ8N2E2 1590 aa13.49□□□□□ -0.25
CHRFAM7A-201ENST00000299847 WWP2O00308 870 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PRODHO43272 600 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 IGFALSP35858 605 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 MAPK8P45983 427 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 NOMO1Q15155 1222 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 NRSN1Q8IZ57 195 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ZMIZ2Q8NF64 920 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 TBATAQ96M53 351 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CDH22Q9UJ99 828 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PLLPQ9Y342 182 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 H3BM21 787 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 EDF1O60869 148 aaKnown RBP13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CDH5P33151 784 aaPredicted RBP13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 FLT3LGP49771 235 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 KLF10Q13118 480 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ATXN7L2Q5T6C5 722 aaPredicted RBP13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 OR10H5Q8NGA6 315 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 LRTOMTQ8WZ04 291 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 GPR20Q99678 358 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 FTHL17Q9BXU8 183 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PIGUQ9H490 435 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 S100A14Q9HCY8 104 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 GOT2P00505 430 aaKnown RBP13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SERPINA1P01009 418 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CDK9P50750 372 aaKnown RBP13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ITGA7Q13683 1181 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 GTF2H2Q13888 395 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 RNF220Q5VTB9 566 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 GTF2H2CQ6P1K8 395 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 C7orf57Q8NEG2 295 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ACMSDQ8TDX5 336 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 MFSD3Q96ES6 412 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 GAL3ST4Q96RP7 486 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 C3orf14Q9HBI5 128 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CTPS2Q9NRF8 586 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 BCKDKO14874 412 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PGRMC2O15173 223 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 STATHP02808 62 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 GALK1P51570 392 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CPSF7Q8N684 471 aaKnown RBP13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PPTC7Q8NI37 304 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 AGAP2Q99490 1192 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 IPPKQ9H8X2 491 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SORCS3Q9UPU3 1222 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 WBP11Q9Y2W2 641 aaKnown RBP13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 NOBOXO60393 691 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ATG13O75143 517 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 IPO13O94829 963 aaKnown RBP13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CCNE2O96020 404 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 FABP3P05413 133 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 RPL3P39023 403 aaKnown RBP13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CREMQ03060 361 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ZNF846Q147U1 533 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 IL23RQ5VWK5 629 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 MON1AQ86VX9 555 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 UBR7Q8N806 425 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CLEC4CQ8WTT0 213 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 CLP1Q92989 425 aaKnown RBP13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 TLE6Q9H808 572 aa13.48□□□□□ -0.25
CHRFAM7A-201ENST00000299847 LRRC10BA6NIK2 292 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 OR1F1O43749 312 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 METTL18O95568 372 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 FGBP02675 491 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 FBXO15Q8NCQ5 510 aaPredicted RBP13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ZNF483Q8TF39 744 aaPredicted RBP13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 PLGRKTQ9HBL7 147 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ING4Q9UNL4 249 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 TESMINQ9Y4I5 508 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 ARL5AQ9Y689 179 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 SMIM28A0A1B0GU29 152 aa13.47□□□□□ -0.25
CHRFAM7A-201ENST00000299847 MAGEB3O15480 346 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms