RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 PFKPQ01813 784 aa13.43□□□□□ -0.26
TTC39B-201ENST00000297615 PTRHD1Q6GMV3 140 aaKnown RBP13.43□□□□□ -0.26
TTC39B-201ENST00000297615 BRSK1Q8TDC3 778 aa13.43□□□□□ -0.26
TTC39B-201ENST00000297615 TWIST2Q8WVJ9 160 aa13.43□□□□□ -0.26
TTC39B-201ENST00000297615 IGSF21Q96ID5 467 aa13.43□□□□□ -0.26
TTC39B-201ENST00000297615 BEGAINQ9BUH8 593 aa13.43□□□□□ -0.26
TTC39B-201ENST00000297615 CCDC28BQ9BUN5 200 aa13.43□□□□□ -0.26
TTC39B-201ENST00000297615 SQORQ9Y6N5 450 aa13.43□□□□□ -0.26
TTC39B-201ENST00000297615 MIA3Q5JRA6 1907 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 C2orf81A6NN90 581 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 ACOT8O14734 319 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 NDST3O95803 873 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 FAM58BPP0C7Q3 252 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 CD1DP15813 335 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 ZNF678Q5SXM1 525 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 DHFR2Q86XF0 187 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 CNTN4Q8IWV2 1026 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 ADGRG2Q8IZP9 1017 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 BBS5Q8N3I7 341 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 CYGBQ8WWM9 190 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 CCT7Q99832 543 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 HGH1Q9BTY7 390 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 BCAP29Q9UHQ4 241 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 TSC2P49815 1807 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 ANKRD66B4E2M5 251 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 INPP4BO15327 924 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 SNX2O60749 519 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 ZNF37AP17032 561 aaPredicted RBP13.42□□□□□ -0.26
TTC39B-201ENST00000297615 HOXC13P31276 330 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 HSPA7P48741 367 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 HTR6P50406 440 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 DGKQP52824 942 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 TIGD2Q4W5G0 525 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 TBCELQ5QJ74 424 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 ARMC3Q5W041 872 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 CYHR1Q6ZMK1 362 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 RAB44Q7Z6P3 723 aaPredicted RBP13.42□□□□□ -0.26
TTC39B-201ENST00000297615 ARHGAP18Q8N392 663 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 LKAAEAR1Q8TD35 194 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 CIPCQ9C0C6 399 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 TUBB1Q9H4B7 451 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 ASB8Q9H765 288 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 VPS51Q9UID3 782 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 MBD1Q9UIS9 605 aaPredicted RBP13.42□□□□□ -0.26
TTC39B-201ENST00000297615 SLC30A1Q9Y6M5 507 aa13.42□□□□□ -0.26
TTC39B-201ENST00000297615 TEX28O15482 410 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 CACNG3O60359 315 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 B3GALT4O96024 378 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 TFAP2AP05549 437 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 GNAO1P09471 354 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 ATXN8OSP0DMR3 200 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 ATP6V1B2P21281 511 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 CD70P32970 193 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 HMGCS1Q01581 520 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 SQLEQ14534 574 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 ACAP2Q15057 778 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 SF1Q15637 639 aaKnown RBP13.41□□□□□ -0.26
TTC39B-201ENST00000297615 ADGRF1Q5T601 910 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 AFMIDQ63HM1 303 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 FRA10AC1Q70Z53 315 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 LSRQ86X29 649 aaPredicted RBP13.41□□□□□ -0.26
TTC39B-201ENST00000297615 FUNDC1Q8IVP5 155 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 OFCC1Q8IZS5 231 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 LINC00597Q9H2U6 94 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 NSUN3Q9H649 340 aaKnown RBP13.41□□□□□ -0.26
TTC39B-201ENST00000297615 FARSBQ9NSD9 589 aaKnown RBP13.41□□□□□ -0.26
TTC39B-201ENST00000297615 PRSS21Q9Y6M0 314 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 LAMA1P25391 3075 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 MTHFD2P13995 350 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 CAPN3P20807 821 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 IMPDH1P20839 514 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 HSPA14Q0VDF9 509 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 MRPL58Q14197 206 aaKnown RBP13.41□□□□□ -0.26
TTC39B-201ENST00000297615 MYLK3Q32MK0 819 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 PARP15Q460N3 678 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 CHST15Q7LFX5 561 aaPredicted RBP13.41□□□□□ -0.26
TTC39B-201ENST00000297615 ZNF786Q8N393 782 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 CPSF7Q8N684 471 aaKnown RBP13.41□□□□□ -0.26
TTC39B-201ENST00000297615 BEND7Q8N7W2 519 aaPredicted RBP13.41□□□□□ -0.26
TTC39B-201ENST00000297615 ZNF461Q8TAF7 563 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 TCEAL4Q96EI5 215 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 FAM192AQ9GZU8 254 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 TAS2R13Q9NYV9 303 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 TRMT6Q9UJA5 497 aaKnown RBP13.41□□□□□ -0.26
TTC39B-201ENST00000297615 LOC285095A0A1B0GVY8 99 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 MROH6A6NGR9 719 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 GIPC1O14908 333 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 AZIN1O14977 448 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 FOXD2O60548 495 aaPredicted RBP13.41□□□□□ -0.26
TTC39B-201ENST00000297615 SMIM18P0DKX4 95 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 STC1P52823 247 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 UFM1P61960 85 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 LRP8Q14114 963 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 FAM47BQ8NA70 645 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 CYB5D2Q8WUJ1 264 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 MFSD1Q9H3U5 465 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 ZNF385DQ9H6B1 395 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 ZDHHC7Q9NXF8 308 aa13.41□□□□□ -0.26
TTC39B-201ENST00000297615 CNOT6Q9ULM6 557 aaKnown RBP13.41□□□□□ -0.26
TTC39B-201ENST00000297615 SLC7A4O43246 635 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms