RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 FBXW2Q9UKT8 454 aa17.18■□□□□ 0.34
SHANK1-201ENST00000293441 G3V2T6 193 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 KPNA4O00629 521 aaPredicted RBP17.17■□□□□ 0.34
SHANK1-201ENST00000293441 KHDRBS3O75525 346 aaKnown RBP17.17■□□□□ 0.34
SHANK1-201ENST00000293441 MT-CYBP00156 380 aaPredicted RBP17.17■□□□□ 0.34
SHANK1-201ENST00000293441 BPGMP07738 259 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 NDST2P52849 883 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 GPM6BQ13491 265 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 ABRAXAS1Q6UWZ7 409 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 MCEMP1Q8IX19 187 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 ZNF567Q8N184 647 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 SLC9A7Q96T83 725 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 CCDC177Q9NQR7 707 aaPredicted RBP17.17■□□□□ 0.34
SHANK1-201ENST00000293441 TCAF1Q9Y4C2 921 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 MAP4K5Q9Y4K4 846 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 RBM7Q9Y580 266 aaKnown RBP17.17■□□□□ 0.34
SHANK1-201ENST00000293441 PCDHGB3Q9Y5G1 929 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 GNPDA1P46926 289 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 GDF6Q6KF10 455 aaPredicted RBP17.17■□□□□ 0.34
SHANK1-201ENST00000293441 PTCD2Q8WV60 388 aaKnown RBP17.17■□□□□ 0.34
SHANK1-201ENST00000293441 TEFMQ96QE5 360 aaKnown RBP17.17■□□□□ 0.34
SHANK1-201ENST00000293441 IL12RB2Q99665 862 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 TBC1D10AQ9BXI6 508 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 PRDM8Q9NQV8 689 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 CMTM6Q9NX76 183 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 FZD10Q9ULW2 581 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 U3KQV3 271 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 GRIN2DO15399 1336 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 A0A1W2PRU2 124 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 C9IYK1 514 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 UNC5CO95185 931 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 MYL9P24844 172 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 ACLYP53396 1101 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 GJA9P57773 515 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 SEMG2Q02383 582 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 GALNT18Q6P9A2 607 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 UBR7Q8N806 425 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 DCBLD1Q8N8Z6 715 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 OR10H5Q8NGA6 315 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 SLC25A51Q9H1U9 297 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 WDR55Q9H6Y2 383 aaPredicted RBP17.17■□□□□ 0.34
SHANK1-201ENST00000293441 SEC14L3Q9UDX4 400 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 IGLV3-22A0A075B6J6 115 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 NUDT17P0C025 328 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 CRHR1P34998 444 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 SLC7A2P52569 658 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 PRMT2P55345 433 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 PPM1JQ5JR12 505 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 BROXQ5VW32 411 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 FOXR2Q6PJQ5 311 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 TTC29Q8NA56 475 aaPredicted RBP17.17■□□□□ 0.34
SHANK1-201ENST00000293441 TWIST2Q8WVJ9 160 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 AUTS2Q8WXX7 1259 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 GTF2H2Q13888 395 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 PLEKHG4Q58EX7 1191 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 GTF2H2CQ6P1K8 395 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 SIRPGQ9P1W8 387 aa17.17■□□□□ 0.34
SHANK1-201ENST00000293441 MED1Q15648 1581 aaPredicted RBP17.17■□□□□ 0.34
SHANK1-201ENST00000293441 STK16O75716 305 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 IFNGP01579 166 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 L1CAMP32004 1257 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 FOXM1Q08050 763 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 SLC10A6Q3KNW5 377 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 MED27Q6P2C8 311 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 ZNF730Q6ZMV8 503 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 SIDT2Q8NBJ9 832 aaKnown RBP17.16■□□□□ 0.34
SHANK1-201ENST00000293441 ANKRD27Q96NW4 1050 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 IPPKQ9H8X2 491 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 SH3GLB1Q9Y371 365 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 MFN2O95140 757 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 NMBRP28336 390 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 ADSSP30520 456 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 HNRNPH3P31942 346 aaKnown RBP17.16■□□□□ 0.34
SHANK1-201ENST00000293441 ZNF280AP59817 542 aaPredicted RBP17.16■□□□□ 0.34
SHANK1-201ENST00000293441 JAZF1Q86VZ6 243 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 PMEPA1Q969W9 287 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 GINS4Q9BRT9 223 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 NOL6Q9H6R4 1146 aaKnown RBP17.16■□□□□ 0.34
SHANK1-201ENST00000293441 MIOSQ9NXC5 875 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 FBXW11Q9UKB1 542 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 DHX15O43143 795 aaKnown RBP17.16■□□□□ 0.34
SHANK1-201ENST00000293441 POLR2JP52435 117 aaKnown RBP17.16■□□□□ 0.34
SHANK1-201ENST00000293441 DAOAP59103 153 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 RFX4Q33E94 735 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 CERS6Q6ZMG9 384 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 CADM2Q8N3J6 435 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 RTL3Q8N8U3 475 aaKnown RBP17.16■□□□□ 0.34
SHANK1-201ENST00000293441 SCAMP5Q8TAC9 235 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 C2orf15Q8WU43 125 aaKnown RBP17.16■□□□□ 0.34
SHANK1-201ENST00000293441 TFAP2BQ92481 460 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 CLDN4O14493 209 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 GIMD1P0DJR0 217 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 PTPN5P54829 565 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 XKR4Q5GH76 650 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 CLEC4CQ8WTT0 213 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 SLC44A1Q8WWI5 657 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 C15orf41Q9Y2V0 281 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 C2orf71A6NGG8 1288 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 TIE1P35590 1138 aa17.16■□□□□ 0.34
SHANK1-201ENST00000293441 OMPP47874 163 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms