RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 TRPM4Q8TD43 1214 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 HDAC10Q969S8 669 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 LINGO1Q96FE5 620 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 ZNF317Q96PQ6 595 aaPredicted RBP10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 CLCC1Q96S66 551 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 SLC6A15Q9H2J7 730 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 CHST10O43529 356 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 ORC5O43913 435 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 C2P06681 752 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 MAGEA2P43356 314 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 ABRQ12979 859 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 LY6KQ17RY6 165 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 MIIPQ5JXC2 388 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 MAP1SQ66K74 1059 aaPredicted RBP10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 TPGS1Q6ZTW0 290 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 POF1BQ8WVV4 589 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 TAMM41Q96BW9 452 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 GPER1Q99527 375 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 NCANO14594 1321 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 ZNF541Q9H0D2 1346 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 EML1O00423 815 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 RSL1D1O76021 490 aaKnown RBP10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 TGFB3P10600 412 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 IST1P53990 364 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 TCEA2Q15560 299 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 FNDC3BQ53EP0 1204 aaKnown RBP10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 OGFOD2Q6N063 350 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 REPS2Q8NFH8 660 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 OR4A15Q8NGL6 344 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 GLIS2Q9BZE0 524 aaPredicted RBP10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 RRAGCQ9HB90 399 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 CKLFQ9UBR5 152 aa10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 CNOT6Q9ULM6 557 aaKnown RBP10.68□□□□□ -0.7
PKNOX1-201ENST00000291547 PLIN3O60664 434 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 DNTTP04053 509 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 MARSP56192 900 aaKnown RBP10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 ACTR3P61158 418 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 COL9A3Q14050 684 aaPredicted RBP10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 RTL4Q6ZR62 310 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 ZZZ3Q8IYH5 903 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 FAM71AQ8IYT1 594 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 SENP8Q96LD8 212 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 ZNF670Q9BS34 389 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 COL1A1P02452 1464 aaPredicted RBP10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 ROBO3Q96MS0 1386 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 M0QX08 132 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 FBP2O00757 339 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 MID1O15344 667 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 PRKD3O94806 890 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 PGRP06401 933 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 GOT1P17174 413 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 TUFMP49411 452 aaKnown RBP10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 CLK3P49761 638 aaKnown RBP10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 MANFP55145 182 aaKnown RBP10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 VBP1P61758 197 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 GALNTL5Q7Z4T8 443 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 GLIS3Q8NEA6 775 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 OR10H5Q8NGA6 315 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 HSFY1Q96LI6 401 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 HNRNPABQ99729 332 aaKnown RBP10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 C1QTNF7Q9BXJ2 289 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 TRIM2Q9C040 744 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 GBA2Q9HCG7 927 aaPredicted RBP10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 NKX1-2Q9UD57 310 aaPredicted RBP10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 ATPIF1Q9UII2 106 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 SH3PXD2BA1X283 911 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 SLURP2P0DP57 97 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 PEX2P28328 305 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 ALDH4A1P30038 563 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 ATN1P54259 1190 aaPredicted RBP10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 AP3S2P59780 193 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 MAXP61244 160 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 RPL7AP62424 266 aaKnown RBP10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 SRSF11Q05519 484 aaKnown RBP10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 GRSF1Q12849 480 aaKnown RBP eCLIP10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 EFR3AQ14156 821 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 C6orf183Q5T699 404 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 CPTPQ5TA50 214 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 KLHDC10Q6PID8 442 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 CHST15Q7LFX5 561 aaPredicted RBP10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 SH3RF1Q7Z6J0 888 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 LAPTM4BQ86VI4 370 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 OR8H3Q8N146 312 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 CHST4Q8NCG5 386 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 SUSD6Q92537 303 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 FATE1Q969F0 183 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 RFT1Q96AA3 541 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 GRHL1Q9NZI5 618 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 PLLPQ9Y342 182 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 TOR1BO14657 336 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 PAPSS1O43252 624 aaPredicted RBP10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 TBX1O43435 398 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 REM1O75628 298 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 TGDSO95455 350 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 ATP5C1P36542 298 aaKnown RBP10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 SLC12A3P55017 1021 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 STXBP1P61764 594 aaKnown RBP10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 FMO1Q01740 532 aa10.67□□□□□ -0.7
PKNOX1-201ENST00000291547 ZNF697Q5TEC3 545 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms