RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 STARD7Q9NQZ5 370 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 RASSF1Q9NS23 344 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 ADAMTS5Q9UNA0 930 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 NOTOA8MTQ0 251 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 MATN3O15232 486 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 IFI30P13284 250 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 AOC1P19801 751 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 ITGALP20701 1170 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 RPL9P32969 192 aaKnown RBP12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 NNMTP40261 264 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 ZNF135P52742 658 aaPredicted RBP12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 ITGA1P56199 1179 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 PLD1Q13393 1074 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 SIM2Q14190 667 aaPredicted RBP12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 FAM110CQ1W6H9 321 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 GCNT7Q6ZNI0 430 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 TMEM169Q96HH4 297 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 ZBED3Q96IU2 234 aaPredicted RBP12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 FBRSL1Q9HCM7 1045 aaKnown RBP12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 EIF2B3Q9NR50 452 aaKnown RBP12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 TOR4AQ9NXH8 423 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 CRNNQ9UBG3 495 aaPredicted RBP12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 A0A1W2PQ72 361 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 NPEPPSL1A6NEC2 478 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 MGAT4DA6NG13 374 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 H3BMM5 538 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 J3KR12 359 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 PROZP22891 400 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 CCNCP24863 283 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 RFX3P48380 749 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 PUDPQ08623 228 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 MED22Q15528 200 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 PDCD4Q53EL6 469 aaKnown RBP12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 INO80DQ53TQ3 878 aaPredicted RBP12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 TNFAIP8L3Q5GJ75 292 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 MON1AQ86VX9 555 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 ACTRT2Q8TDY3 377 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 MLPHQ9BV36 600 aaPredicted RBP12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 C20orf27Q9GZN8 174 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 GIT1Q9Y2X7 761 aa12.48□□□□□ -0.41
SLC6A1-201ENST00000287766 GABBR2O75899 941 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 OR6B1O95007 311 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 PFKMP08237 780 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 ELNP15502 786 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 MYL12AP19105 171 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 FBXW4P57775 412 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 TOP3AQ13472 1001 aaPredicted RBP12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 BRMS1LQ5PSV4 323 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 TAPT1Q6NXT6 567 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 ENDOVQ8N8Q3 282 aaKnown RBP12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 OR13C4Q8NGS5 318 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 LINGO1Q96FE5 620 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 COQ10BQ9H8M1 238 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 SP140LQ9H930 580 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 KCNK13Q9HB14 408 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 ZSCAN32Q9NX65 697 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 MOCS1Q9NZB8 636 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 MBD2Q9UBB5 411 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 OGDHLQ9ULD0 1010 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 NHSL1Q5SYE7 1610 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 FAM240BA0A1B0GVZ2 78 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 BOLA2-SMG1P6H3BVE0 249 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 SSNA1O43805 119 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 HOXA11P31270 313 aaPredicted RBP12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 CHI3L1P36222 383 aaPredicted RBP12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 ATP5C1P36542 298 aaKnown RBP12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 SEMG2Q02383 582 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 PHKG1Q16816 387 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 ALFQ53S48 1182 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 IL23RQ5VWK5 629 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 DDX53Q86TM3 631 aaKnown RBP12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 GPR21Q99679 349 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 CCDC106Q9BWC9 280 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 ABCB9Q9NP78 766 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 ING3Q9NXR8 418 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 ING4Q9UNL4 249 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 GTF2A1LQ9UNN4 478 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 ARL5AQ9Y689 179 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 FAM220BPB1ANY3 271 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 TP73O15350 636 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 CYBBP04839 570 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 PAX3P23760 479 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 HSPA14Q0VDF9 509 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 REP15Q6BDI9 236 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 ZFAND2BQ8WV99 257 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 PQBP1O60828 265 aaKnown RBP12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 TFPTP0C1Z6 253 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 GPC1P35052 558 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 MAGEA10P43363 369 aaPredicted RBP12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 RPL38P63173 70 aaKnown RBP12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 NCCRP1Q6ZVX7 275 aaPredicted RBP12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 DET1Q7L5Y6 550 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 DPP10Q8N608 796 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 NPWQ8N729 165 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 TWIST2Q8WVJ9 160 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 TMEM209Q96SK2 561 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 SLC9A7Q96T83 725 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 CCDC59Q9P031 241 aaKnown RBP12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 CNTN3Q9P232 1028 aa12.47□□□□□ -0.41
SLC6A1-201ENST00000287766 RAPGEFL1Q9UHV5 662 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms