RNA–Protein interactions for RNA: ENST00000285106.10

CXXC1-201, Transcript of CXXC finger protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXXC1, Length 2,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-201ENST00000285106 ATP13A1Q9HD20 1204 aa16.6■□□□□ 0.25
CXXC1-201ENST00000285106 C8orf4Q9NR00 106 aa16.6■□□□□ 0.25
CXXC1-201ENST00000285106 TRMT13Q9NUP7 481 aaKnown RBP16.6■□□□□ 0.25
CXXC1-201ENST00000285106 KCTD3Q9Y597 815 aa16.6■□□□□ 0.25
CXXC1-201ENST00000285106 PCDHA9Q9Y5H5 950 aa16.6■□□□□ 0.25
CXXC1-201ENST00000285106 V9GYQ6 96 aa16.6■□□□□ 0.25
CXXC1-201ENST00000285106 TDRD15B5MCY1 1934 aaKnown RBP16.6■□□□□ 0.25
CXXC1-201ENST00000285106 COL4A4P53420 1690 aaPredicted RBP16.6■□□□□ 0.25
CXXC1-201ENST00000285106 TRIM32Q13049 653 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 BFSP2Q13515 415 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 TMEM53Q6P2H8 277 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 GLB1LQ6UWU2 654 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 DCP1BQ8IZD4 617 aaKnown RBP16.59■□□□□ 0.25
CXXC1-201ENST00000285106 MIER2Q8N344 545 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 PNPT1Q8TCS8 783 aaKnown RBP16.59■□□□□ 0.25
CXXC1-201ENST00000285106 ERLEC1Q96DZ1 483 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 MUS81Q96NY9 551 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 TRMOQ9BU70 441 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 CRYL1Q9Y2S2 319 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 H0Y858 1186 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 RPLP2P05387 115 aaKnown RBP16.59■□□□□ 0.25
CXXC1-201ENST00000285106 MMP2P08253 660 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 HMBSP08397 361 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 IDUAP35475 653 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 OR1G1P47890 313 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 EIF2B2P49770 351 aaKnown RBP16.59■□□□□ 0.25
CXXC1-201ENST00000285106 GSK3BP49841 420 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 FOXA1P55317 472 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 ACAP2Q15057 778 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 SIRPB2Q5JXA9 342 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 GPR158Q5T848 1215 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 ZNF598Q86UK7 904 aaKnown RBP16.59■□□□□ 0.25
CXXC1-201ENST00000285106 DNAJB14Q8TBM8 379 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 SGCDQ92629 289 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.59■□□□□ 0.25
CXXC1-201ENST00000285106 SLC30A3Q99726 388 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 CORO1BQ9BR76 489 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 LHPPQ9H008 270 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 FBXO44Q9H4M3 255 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 ALG2Q9H553 416 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 PRDM5Q9NQX1 630 aaPredicted RBP16.59■□□□□ 0.25
CXXC1-201ENST00000285106 TLR9Q9NR96 1032 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 INTS10Q9NVR2 710 aaKnown RBP16.59■□□□□ 0.25
CXXC1-201ENST00000285106 FNIP2Q9P278 1114 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 MARCH4Q9P2E8 410 aaPredicted RBP16.59■□□□□ 0.25
CXXC1-201ENST00000285106 PTPRDP23468 1912 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 PIP5K1BO14986 540 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 SLC4A1P02730 911 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 CDKN2DP55273 166 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 CRHR2Q13324 411 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 ZIK1Q3SY52 487 aaPredicted RBP16.59■□□□□ 0.25
CXXC1-201ENST00000285106 UNC50Q53HI1 259 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 OTUD3Q5T2D3 398 aaPredicted RBP16.59■□□□□ 0.25
CXXC1-201ENST00000285106 RAP1GAP2Q684P5 730 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 TMEM207Q6UWW9 146 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 PIM3Q86V86 326 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 CIR1Q86X95 450 aaPredicted RBP16.59■□□□□ 0.25
CXXC1-201ENST00000285106 PHYKPLQ8IUZ5 450 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 SH3RF2Q8TEC5 729 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 IGSF8Q969P0 613 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 TAMM41Q96BW9 452 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 SLX1AQ9BQ83 275 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 YTHDF1Q9BYJ9 559 aaKnown RBP16.59■□□□□ 0.25
CXXC1-201ENST00000285106 TMEM248Q9NWD8 314 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 PSME2Q9UL46 239 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 B3GNT3Q9Y2A9 372 aa16.59■□□□□ 0.25
CXXC1-201ENST00000285106 PAPSS2O95340 614 aaPredicted RBP16.58■□□□□ 0.24
CXXC1-201ENST00000285106 TMED10P49755 219 aaKnown RBP16.58■□□□□ 0.24
CXXC1-201ENST00000285106 FBXL22Q6P050 247 aa16.58■□□□□ 0.24
CXXC1-201ENST00000285106 ZNF683Q8IZ20 524 aa16.58■□□□□ 0.24
CXXC1-201ENST00000285106 ATAD1Q8NBU5 361 aa16.58■□□□□ 0.24
CXXC1-201ENST00000285106 RAB2BQ8WUD1 216 aa16.58■□□□□ 0.24
CXXC1-201ENST00000285106 EXT2Q93063 718 aa16.58■□□□□ 0.24
CXXC1-201ENST00000285106 TMEM125Q96AQ2 219 aa16.58■□□□□ 0.24
CXXC1-201ENST00000285106 SEPHS2Q99611 448 aa16.58■□□□□ 0.24
CXXC1-201ENST00000285106 HEPHQ9BQS7 1158 aa16.58■□□□□ 0.24
CXXC1-201ENST00000285106 ARHGAP39Q9C0H5 1083 aa16.58■□□□□ 0.24
CXXC1-201ENST00000285106 KRBA1A5PL33 1030 aa16.58■□□□□ 0.24
CXXC1-201ENST00000285106 SLC7A4O43246 635 aa16.58■□□□□ 0.24
CXXC1-201ENST00000285106 SYNCRIPO60506 623 aaKnown RBP16.58■□□□□ 0.24
CXXC1-201ENST00000285106 GJB3O75712 270 aa16.58■□□□□ 0.24
CXXC1-201ENST00000285106 LDLRP01130 860 aa16.58■□□□□ 0.24
CXXC1-201ENST00000285106 SHMT2P34897 504 aa16.58■□□□□ 0.24
CXXC1-201ENST00000285106 MTA1Q13330 715 aa16.58■□□□□ 0.24
CXXC1-201ENST00000285106 NFE2Q16621 373 aaPredicted RBP16.58■□□□□ 0.24
CXXC1-201ENST00000285106 GEN1Q17RS7 908 aa16.58■□□□□ 0.24
CXXC1-201ENST00000285106 TRIM16LQ309B1 348 aa16.58■□□□□ 0.24
CXXC1-201ENST00000285106 MSANTD2Q6P1R3 559 aa16.58■□□□□ 0.24
CXXC1-201ENST00000285106 CLYBLQ8N0X4 340 aa16.58■□□□□ 0.24
CXXC1-201ENST00000285106 RYBPQ8N488 228 aaPredicted RBP16.58■□□□□ 0.24
CXXC1-201ENST00000285106 TTC9BQ8N6N2 239 aa16.58■□□□□ 0.24
CXXC1-201ENST00000285106 TWIST2Q8WVJ9 160 aa16.58■□□□□ 0.24
CXXC1-201ENST00000285106 L3HYPDHQ96EM0 354 aa16.58■□□□□ 0.24
CXXC1-201ENST00000285106 TBATAQ96M53 351 aa16.58■□□□□ 0.24
CXXC1-201ENST00000285106 ZNF639Q9UID6 485 aa16.58■□□□□ 0.24
CXXC1-201ENST00000285106 ANAPC2Q9UJX6 822 aa16.58■□□□□ 0.24
CXXC1-201ENST00000285106 GABRQQ9UN88 632 aa16.58■□□□□ 0.24
CXXC1-201ENST00000285106 USP22Q9UPT9 525 aa16.58■□□□□ 0.24
CXXC1-201ENST00000285106 SEPT4O43236 478 aa16.57■□□□□ 0.24
CXXC1-201ENST00000285106 CDK14O94921 469 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms