RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 PPIP5K2O43314 1243 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 RGS11O94810 467 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 STAMBPO95630 424 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 CCNA2P20248 432 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 TM4SF1P30408 202 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 HOXA11P31270 313 aaPredicted RBP2.75□□□□□ -1.97
CHD1-201ENST00000284049 LIMS1P48059 325 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 MAPKAPK2P49137 400 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 CDH13P55290 713 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 SLC37A1P57057 533 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 FAM3BP58499 235 aaPredicted RBP2.75□□□□□ -1.97
CHD1-201ENST00000284049 DDX39BQ13838 428 aaKnown RBP2.75□□□□□ -1.97
CHD1-201ENST00000284049 FAM153CQ494X1 144 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 PSRC1Q6PGN9 363 aaPredicted RBP2.75□□□□□ -1.97
CHD1-201ENST00000284049 CDK20Q8IZL9 346 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 ABHD11Q8NFV4 315 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 SHKBP1Q8TBC3 707 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 PPP4R1Q8TF05 950 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 MIB2Q96AX9 1013 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 SPSB1Q96BD6 273 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 SPACA9Q96E40 222 aaPredicted RBP2.75□□□□□ -1.97
CHD1-201ENST00000284049 MISP3Q96FF7 219 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 SOX7Q9BT81 388 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 CENPMQ9NSP4 180 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 ETNK2Q9NVF9 386 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 ASNSD1Q9NWL6 643 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 UBAP1Q9NZ09 502 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 TEKT2Q9UIF3 430 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 NEU2Q9Y3R4 380 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 JCADQ9P266 1359 aa2.75□□□□□ -1.97
CHD1-201ENST00000284049 RGS12O14924 1447 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 DAB1O75553 588 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 GSTA2P09210 222 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 ADRA1DP25100 572 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 TYK2P29597 1187 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 CD96P40200 585 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 NUDT6P53370 316 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 COPB1P53618 953 aaKnown RBP2.74□□□□□ -1.97
CHD1-201ENST00000284049 SRSF3P84103 164 aaKnown RBP2.74□□□□□ -1.97
CHD1-201ENST00000284049 SHC2P98077 582 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 KRT76Q01546 638 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 KRT79Q5XKE5 535 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 MSANTD2Q6P1R3 559 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 DENND5BQ6ZUT9 1274 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 SGMS1Q86VZ5 419 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 ABRAQ8N0Z2 381 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 RAB40AQ8WXH6 277 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 NPIPB3Q92617 1050 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 SYN2Q92777 582 aaPredicted RBP2.74□□□□□ -1.97
CHD1-201ENST00000284049 DNASE1L2Q92874 299 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 ORAI1Q96D31 301 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 MTERF3Q96E29 417 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 COG3Q96JB2 828 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 NOL11Q9H8H0 719 aaKnown RBP2.74□□□□□ -1.97
CHD1-201ENST00000284049 CNOT10Q9H9A5 744 aaKnown RBP2.74□□□□□ -1.97
CHD1-201ENST00000284049 GALNT9Q9HCQ5 603 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 LZTFL1Q9NQ48 299 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 ABHD10Q9NUJ1 306 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 USP6P35125 1406 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 BLMP54132 1417 aaPredicted RBP2.74□□□□□ -1.97
CHD1-201ENST00000284049 TCRBV21S2A2A0A5A6 115 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 FAM86B1E9PN63 330 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 SMAD9O15198 467 aaKnown RBP2.74□□□□□ -1.97
CHD1-201ENST00000284049 PJA2O43164 708 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 SEC22BO75396 215 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 TTLL1O95922 423 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 THRBP10828 461 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 TNNI1P19237 187 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 ITGB8P26012 769 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 CHRNA5P30532 468 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 GABRA5P31644 462 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 MTIF2P46199 727 aaKnown RBP2.74□□□□□ -1.97
CHD1-201ENST00000284049 NAPAP54920 295 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 E2F1Q01094 437 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 TLE3Q04726 772 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 FOXM1Q08050 763 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 PMPCAQ10713 525 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 GRAPQ13588 217 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 ANGPT1Q15389 498 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 GAGE13Q4V321 117 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 ZDHHC20Q5W0Z9 365 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 ANKS6Q68DC2 871 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 SEZ6L2Q6UXD5 910 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 DCDC5Q6ZRR9 648 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 PRSS45Q7RTY3 260 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 ARMC9Q7Z3E5 817 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 NUDT13Q86X67 352 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 PLD5Q8N7P1 536 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 INPP5DQ92835 1189 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 SGF29Q96ES7 293 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 ZNF570Q96NI8 536 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 ATG10Q9H0Y0 220 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 ISCUQ9H1K1 167 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 ASAH2Q9NR71 780 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 CHCHD3Q9NX63 227 aaKnown RBP2.74□□□□□ -1.97
CHD1-201ENST00000284049 PLK2Q9NYY3 685 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 HCFC2Q9Y5Z7 792 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 SALL3Q9BXA9 1300 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 C2orf78A6NCI8 922 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 ANXA2P2A6NMY6 339 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms