RNA–Protein interactions for RNA: ENST00000283290.9

ATG3-201, Transcript of autophagy related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-201ENST00000283290 CRLS1Q9UJA2 301 aa17.23■□□□□ 0.35
ATG3-201ENST00000283290 SOX13Q9UN79 622 aa17.23■□□□□ 0.35
ATG3-201ENST00000283290 UTP11Q9Y3A2 253 aaKnown RBP17.23■□□□□ 0.35
ATG3-201ENST00000283290 CACNA1AO00555 2505 aa17.23■□□□□ 0.35
ATG3-201ENST00000283290 TOR1BO14657 336 aa17.23■□□□□ 0.35
ATG3-201ENST00000283290 YKT6O15498 198 aa17.23■□□□□ 0.35
ATG3-201ENST00000283290 FLRT2O43155 660 aa17.23■□□□□ 0.35
ATG3-201ENST00000283290 NME1P15531 152 aaKnown RBP17.23■□□□□ 0.35
ATG3-201ENST00000283290 CSRP1P21291 193 aaKnown RBP17.23■□□□□ 0.35
ATG3-201ENST00000283290 DGKAP23743 735 aa17.23■□□□□ 0.35
ATG3-201ENST00000283290 AK4P27144 223 aaPredicted RBP17.23■□□□□ 0.35
ATG3-201ENST00000283290 HADHAP40939 763 aa17.23■□□□□ 0.35
ATG3-201ENST00000283290 TUBB2AQ13885 445 aa17.23■□□□□ 0.35
ATG3-201ENST00000283290 MORF4L2Q15014 288 aa17.23■□□□□ 0.35
ATG3-201ENST00000283290 SUZ12Q15022 739 aaKnown RBP17.23■□□□□ 0.35
ATG3-201ENST00000283290 SKIDA1Q1XH10 827 aa17.23■□□□□ 0.35
ATG3-201ENST00000283290 DEFB133Q30KQ1 61 aa17.23■□□□□ 0.35
ATG3-201ENST00000283290 PPM1JQ5JR12 505 aa17.23■□□□□ 0.35
ATG3-201ENST00000283290 PHYKPLQ8IUZ5 450 aa17.23■□□□□ 0.35
ATG3-201ENST00000283290 ZNF548Q8NEK5 533 aaPredicted RBP17.23■□□□□ 0.35
ATG3-201ENST00000283290 ZNF669Q96BR6 464 aaPredicted RBP17.23■□□□□ 0.35
ATG3-201ENST00000283290 TUBB2BQ9BVA1 445 aa17.23■□□□□ 0.35
ATG3-201ENST00000283290 SLC13A1Q9BZW2 595 aa17.23■□□□□ 0.35
ATG3-201ENST00000283290 TREX1Q9NSU2 369 aa17.23■□□□□ 0.35
ATG3-201ENST00000283290 MARCH4Q9P2E8 410 aaPredicted RBP17.23■□□□□ 0.35
ATG3-201ENST00000283290 ZNHIT2Q9UHR6 403 aa17.23■□□□□ 0.35
ATG3-201ENST00000283290 PCOLCE2Q9UKZ9 415 aa17.23■□□□□ 0.35
ATG3-201ENST00000283290 CHMP2BQ9UQN3 213 aa17.23■□□□□ 0.35
ATG3-201ENST00000283290 SLC17A4Q9Y2C5 497 aa17.23■□□□□ 0.35
ATG3-201ENST00000283290 GPSM3Q9Y4H4 160 aa17.23■□□□□ 0.35
ATG3-201ENST00000283290 SLC30A1Q9Y6M5 507 aa17.23■□□□□ 0.35
ATG3-201ENST00000283290 SDR42E2A6NKP2 422 aa17.22■□□□□ 0.35
ATG3-201ENST00000283290 DNAJC6O75061 913 aa17.22■□□□□ 0.35
ATG3-201ENST00000283290 PPFIA2O75334 1257 aa17.22■□□□□ 0.35
ATG3-201ENST00000283290 VAPBO95292 243 aa17.22■□□□□ 0.35
ATG3-201ENST00000283290 ARNTP27540 789 aa17.22■□□□□ 0.35
ATG3-201ENST00000283290 TEAD1P28347 426 aa17.22■□□□□ 0.35
ATG3-201ENST00000283290 PLTPP55058 493 aa17.22■□□□□ 0.35
ATG3-201ENST00000283290 KANSL1Q7Z3B3 1105 aa17.22■□□□□ 0.35
ATG3-201ENST00000283290 HOOK3Q86VS8 718 aa17.22■□□□□ 0.35
ATG3-201ENST00000283290 RAVER1Q8IY67 606 aaKnown RBP17.22■□□□□ 0.35
ATG3-201ENST00000283290 EID2Q8N6I1 236 aa17.22■□□□□ 0.35
ATG3-201ENST00000283290 BEND7Q8N7W2 519 aaPredicted RBP17.22■□□□□ 0.35
ATG3-201ENST00000283290 CEP112Q8N8E3 955 aa17.22■□□□□ 0.35
ATG3-201ENST00000283290 KIFC1Q9BW19 673 aa17.22■□□□□ 0.35
ATG3-201ENST00000283290 CDH19Q9H159 772 aa17.22■□□□□ 0.35
ATG3-201ENST00000283290 SAMD15Q9P1V8 674 aa17.22■□□□□ 0.35
ATG3-201ENST00000283290 APPL1Q9UKG1 709 aa17.22■□□□□ 0.35
ATG3-201ENST00000283290 OR2AG2A6NM03 316 aa17.21■□□□□ 0.35
ATG3-201ENST00000283290 CBFA2T3O75081 653 aa17.21■□□□□ 0.35
ATG3-201ENST00000283290 TNFP01375 233 aa17.21■□□□□ 0.35
ATG3-201ENST00000283290 HOXC4P09017 264 aaPredicted RBP17.21■□□□□ 0.35
ATG3-201ENST00000283290 RHOXF2BP0C7M4 288 aa17.21■□□□□ 0.35
ATG3-201ENST00000283290 MLNP12872 115 aa17.21■□□□□ 0.35
ATG3-201ENST00000283290 CTSEP14091 401 aa17.21■□□□□ 0.35
ATG3-201ENST00000283290 ITGALP20701 1170 aa17.21■□□□□ 0.35
ATG3-201ENST00000283290 AKT1P31749 480 aa17.21■□□□□ 0.35
ATG3-201ENST00000283290 FOXN2P32314 431 aa17.21■□□□□ 0.35
ATG3-201ENST00000283290 CTSCP53634 463 aa17.21■□□□□ 0.35
ATG3-201ENST00000283290 PRAMEP78395 509 aa17.21■□□□□ 0.35
ATG3-201ENST00000283290 B4GALNT1Q00973 533 aa17.21■□□□□ 0.35
ATG3-201ENST00000283290 ITGA9Q13797 1035 aa17.21■□□□□ 0.35
ATG3-201ENST00000283290 ZDHHC20Q5W0Z9 365 aa17.21■□□□□ 0.35
ATG3-201ENST00000283290 ZDHHC24Q6UX98 284 aa17.21■□□□□ 0.35
ATG3-201ENST00000283290 CAPN12Q6ZSI9 719 aa17.21■□□□□ 0.35
ATG3-201ENST00000283290 CHST15Q7LFX5 561 aaPredicted RBP17.21■□□□□ 0.35
ATG3-201ENST00000283290 SNX20Q7Z614 316 aa17.21■□□□□ 0.35
ATG3-201ENST00000283290 SERPINA9Q86WD7 417 aa17.21■□□□□ 0.35
ATG3-201ENST00000283290 RASGEF1AQ8N9B8 481 aa17.21■□□□□ 0.35
ATG3-201ENST00000283290 RHBDD1Q8TEB9 315 aa17.21■□□□□ 0.35
ATG3-201ENST00000283290 CFAP36Q96G28 342 aa17.21■□□□□ 0.35
ATG3-201ENST00000283290 VPS35Q96QK1 796 aa17.21■□□□□ 0.35
ATG3-201ENST00000283290 RHOXF2Q9BQY4 288 aa17.21■□□□□ 0.35
ATG3-201ENST00000283290 SLC32A1Q9H598 525 aa17.21■□□□□ 0.35
ATG3-201ENST00000283290 EPB41L5Q9HCM4 733 aa17.21■□□□□ 0.35
ATG3-201ENST00000283290 TRIM39Q9HCM9 518 aa17.21■□□□□ 0.35
ATG3-201ENST00000283290 FAM8A1Q9UBU6 413 aa17.21■□□□□ 0.35
ATG3-201ENST00000283290 COL5A1P20908 1838 aaPredicted RBP17.2■□□□□ 0.34
ATG3-201ENST00000283290 H7C0S8 307 aa17.2■□□□□ 0.34
ATG3-201ENST00000283290 AQP9O43315 295 aa17.2■□□□□ 0.34
ATG3-201ENST00000283290 PYGLP06737 847 aa17.2■□□□□ 0.34
ATG3-201ENST00000283290 GIMD1P0DJR0 217 aa17.2■□□□□ 0.34
ATG3-201ENST00000283290 CEACAM1P13688 526 aa17.2■□□□□ 0.34
ATG3-201ENST00000283290 KELP23276 732 aa17.2■□□□□ 0.34
ATG3-201ENST00000283290 PBLDP30039 288 aaPredicted RBP17.2■□□□□ 0.34
ATG3-201ENST00000283290 ELK3P41970 407 aa17.2■□□□□ 0.34
ATG3-201ENST00000283290 HNRNPKP61978 463 aaKnown RBP eCLIP17.2■□□□□ 0.34
ATG3-201ENST00000283290 ACVR1Q04771 509 aa17.2■□□□□ 0.34
ATG3-201ENST00000283290 TMEM115Q12893 351 aaPredicted RBP17.2■□□□□ 0.34
ATG3-201ENST00000283290 PDIA2Q13087 525 aaKnown RBP17.2■□□□□ 0.34
ATG3-201ENST00000283290 CALCOCO2Q13137 446 aa17.2■□□□□ 0.34
ATG3-201ENST00000283290 DBN1Q16643 649 aa17.2■□□□□ 0.34
ATG3-201ENST00000283290 HIF1AQ16665 826 aa17.2■□□□□ 0.34
ATG3-201ENST00000283290 ANKRD20A4Q4UJ75 823 aa17.2■□□□□ 0.34
ATG3-201ENST00000283290 SPNS2Q8IVW8 549 aa17.2■□□□□ 0.34
ATG3-201ENST00000283290 NXPE1Q8N323 547 aa17.2■□□□□ 0.34
ATG3-201ENST00000283290 BAHD1Q8TBE0 780 aaPredicted RBP17.2■□□□□ 0.34
ATG3-201ENST00000283290 FBXO25Q8TCJ0 367 aa17.2■□□□□ 0.34
ATG3-201ENST00000283290 SGF29Q96ES7 293 aa17.2■□□□□ 0.34
ATG3-201ENST00000283290 STAMBPL1Q96FJ0 436 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms