RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 SH3BGRLO75368 114 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 SMNDC1O75940 238 aaKnown RBP eCLIP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 CALCAP01258 141 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 PRPS2P11908 318 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 KLRK1P26718 216 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 CTSKP43235 329 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 RPL5P46777 297 aaKnown RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 MECP2P51608 486 aaKnown RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 MAPK12P53778 367 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 FOXM1Q08050 763 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 ITGA7Q13683 1181 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 SF3B4Q15427 424 aaKnown RBP eCLIP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 SF1Q15637 639 aaKnown RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 CPSF6Q16630 551 aaKnown RBP eCLIP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 RGS21Q2M5E4 152 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 SLC25A52Q3SY17 297 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 LDLRAP1Q5SW96 308 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 DCST1Q5T197 706 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 RNF43Q68DV7 783 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 APOBEC3HQ6NTF7 200 aaKnown RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 CHRDL2Q6WN34 429 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 MSANTD1Q6ZTZ1 278 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 HEATR4Q86WZ0 1026 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 FAM71AQ8IYT1 594 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 OR52K1Q8NGK4 314 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 OR4A15Q8NGL6 344 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 SNIP1Q8TAD8 396 aaKnown RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 AKT1S1Q96B36 256 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 LINGO1Q96FE5 620 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 SCGB3A2Q96PL1 93 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 EFCAB11Q9BUY7 163 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 CHID1Q9BWS9 393 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 CEP41Q9BYV8 373 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 UNKQ9C0B0 810 aaKnown RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 CDT1Q9H211 546 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 NOL6Q9H6R4 1146 aaKnown RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 AGO3Q9H9G7 860 aaKnown RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 FAM105AQ9NUU6 356 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 PRPF19Q9UMS4 504 aaKnown RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 UBIAD1Q9Y5Z9 338 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 MYO3AQ8NEV4 1616 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 DHRS12A0PJE2 317 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 FADS2P1A8MWK0 482 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 LOC110117498-PIK3R3F6TDL0 507 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 H3BNX3 289 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 MEIS2O14770 477 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 SEPT4O43236 478 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 NUAK1O60285 661 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 KLK3P07288 261 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 HEPACAMQ14CZ8 416 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 TARBP2Q15633 366 aaKnown RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 PPP2R2DQ66LE6 453 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 GJB7Q6PEY0 223 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 RABEPKQ7Z6M1 372 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 ZNF227Q86WZ6 799 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 REXO1L1PQ8IX06 675 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 ZNF540Q8NDQ6 660 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 PIK3R3Q92569 461 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 NR4A3Q92570 626 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 CRISPLD1Q9H336 500 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 SEMA6BQ9H3T3 888 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 SGK2Q9HBY8 427 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 SDHAF3Q9NRP4 125 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 TRMT13Q9NUP7 481 aaKnown RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 RHBDL2Q9NX52 303 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 PCYOX1Q9UHG3 505 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 ADGRE2Q9UHX3 823 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 GRIP1Q9Y3R0 1128 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 SQORQ9Y6N5 450 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 COL5A2P05997 1499 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 BTNL10A8MVZ5 291 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 TRIM38O00635 465 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 TNFRSF10BO14763 440 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 PSIP1O75475 530 aaKnown RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 GLRA2P23416 452 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 RBL1P28749 1068 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 GNALP38405 381 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 PBX3P40426 434 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 DGKGP49619 791 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 ARF5P84085 180 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 TUBB3Q13509 450 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 NT5DC1Q5TFE4 455 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 EIF5AL1Q6IS14 154 aaKnown RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 GRHL2Q6ISB3 625 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 CHST9Q7L1S5 443 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 COX18Q8N8Q8 333 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 MAB21L3Q8N8X9 362 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 SNX33Q8WV41 574 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 PRCCQ92733 491 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 AZIN2Q96A70 460 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 ZSWIM3Q96MP5 696 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 FERD3LQ96RJ6 166 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 WDR26Q9H7D7 661 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 RC3H2Q9HBD1 1191 aaKnown RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 ANKHQ9HCJ1 492 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 CHMP1AQ9HD42 196 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-201ENST00000283254 ZDHHC9Q9Y397 364 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 PCDHB3Q9Y5E6 796 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 PCDHGA11Q9Y5H2 935 aa4.04□□□□□ -1.76
SCN3A-201ENST00000283254 CLTCQ00610 1675 aaKnown RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms