RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 UNC50Q53HI1 259 aa20.79■□□□□ 0.92
YBX3-202ENST00000279550 FAM151BQ6UXP7 276 aa20.79■□□□□ 0.92
YBX3-202ENST00000279550 FRMD7Q6ZUT3 714 aa20.79■□□□□ 0.92
YBX3-202ENST00000279550 PLCD3Q8N3E9 789 aa20.79■□□□□ 0.92
YBX3-202ENST00000279550 PCDH20Q8N6Y1 951 aaKnown RBP20.79■□□□□ 0.92
YBX3-202ENST00000279550 POU5F2Q8N7G0 328 aa20.79■□□□□ 0.92
YBX3-202ENST00000279550 GIMAP7Q8NHV1 300 aa20.79■□□□□ 0.92
YBX3-202ENST00000279550 ATOH8Q96SQ7 321 aa20.79■□□□□ 0.92
YBX3-202ENST00000279550 TCF7L2Q9NQB0 619 aa20.79■□□□□ 0.92
YBX3-202ENST00000279550 CAPN8A6NHC0 703 aa20.78■□□□□ 0.92
YBX3-202ENST00000279550 A8MX80 341 aa20.78■□□□□ 0.92
YBX3-202ENST00000279550 UBXN8O00124 270 aa20.78■□□□□ 0.92
YBX3-202ENST00000279550 SRPRAP08240 638 aaKnown RBP20.78■□□□□ 0.92
YBX3-202ENST00000279550 IMPDH1P20839 514 aa20.78■□□□□ 0.92
YBX3-202ENST00000279550 EPHA3P29320 983 aa20.78■□□□□ 0.92
YBX3-202ENST00000279550 SERPINA4P29622 427 aa20.78■□□□□ 0.92
YBX3-202ENST00000279550 SERPINB5P36952 375 aa20.78■□□□□ 0.92
YBX3-202ENST00000279550 NNMTP40261 264 aa20.78■□□□□ 0.92
YBX3-202ENST00000279550 SMAD2Q15796 467 aaKnown RBP20.78■□□□□ 0.92
YBX3-202ENST00000279550 PDCD2Q16342 344 aaPredicted RBP20.78■□□□□ 0.92
YBX3-202ENST00000279550 HABP4Q5JVS0 413 aaKnown RBP20.78■□□□□ 0.92
YBX3-202ENST00000279550 SH2D4BQ5SQS7 431 aa20.78■□□□□ 0.92
YBX3-202ENST00000279550 TSPAN33Q86UF1 283 aa20.78■□□□□ 0.92
YBX3-202ENST00000279550 SLC22A9Q8IVM8 553 aa20.78■□□□□ 0.92
YBX3-202ENST00000279550 PAF1Q8N7H5 531 aa20.78■□□□□ 0.92
YBX3-202ENST00000279550 SIDT2Q8NBJ9 832 aaKnown RBP20.78■□□□□ 0.92
YBX3-202ENST00000279550 RBM15BQ8NDT2 890 aaKnown RBP20.78■□□□□ 0.92
YBX3-202ENST00000279550 L3HYPDHQ96EM0 354 aa20.78■□□□□ 0.92
YBX3-202ENST00000279550 KCNK12Q9HB15 430 aa20.78■□□□□ 0.92
YBX3-202ENST00000279550 ZFYVE1Q9HBF4 777 aa20.78■□□□□ 0.92
YBX3-202ENST00000279550 VTI1BQ9UEU0 232 aa20.78■□□□□ 0.92
YBX3-202ENST00000279550 LIMD1Q9UGP4 676 aa20.78■□□□□ 0.92
YBX3-202ENST00000279550 VPS9D1Q9Y2B5 631 aa20.78■□□□□ 0.92
YBX3-202ENST00000279550 KIAA1549LQ6ZVL6 1849 aa20.78■□□□□ 0.92
YBX3-202ENST00000279550 LRRC14BA6NHZ5 514 aa20.78■□□□□ 0.92
YBX3-202ENST00000279550 MEI4A8MW99 385 aa20.78■□□□□ 0.92
YBX3-202ENST00000279550 MTHFD2P13995 350 aa20.78■□□□□ 0.92
YBX3-202ENST00000279550 NFKB2Q00653 900 aa20.78■□□□□ 0.92
YBX3-202ENST00000279550 LSM12Q3MHD2 195 aaKnown RBP20.78■□□□□ 0.92
YBX3-202ENST00000279550 AARS2Q5JTZ9 985 aaKnown RBP20.78■□□□□ 0.92
YBX3-202ENST00000279550 ZNF678Q5SXM1 525 aa20.78■□□□□ 0.92
YBX3-202ENST00000279550 PTGR2Q8N8N7 351 aaPredicted RBP20.78■□□□□ 0.92
YBX3-202ENST00000279550 CSGALNACT1Q8TDX6 532 aa20.78■□□□□ 0.92
YBX3-202ENST00000279550 DERL2Q9GZP9 239 aa20.78■□□□□ 0.92
YBX3-202ENST00000279550 P2RY12Q9H244 342 aa20.78■□□□□ 0.92
YBX3-202ENST00000279550 TFB2MQ9H5Q4 396 aaKnown RBP20.78■□□□□ 0.92
YBX3-202ENST00000279550 SLC30A1Q9Y6M5 507 aa20.78■□□□□ 0.92
YBX3-202ENST00000279550 NPIPB15A6NHN6 443 aaPredicted RBP20.77■□□□□ 0.92
YBX3-202ENST00000279550 UBFD1O14562 309 aaKnown RBP20.77■□□□□ 0.92
YBX3-202ENST00000279550 DCXO43602 365 aa20.77■□□□□ 0.92
YBX3-202ENST00000279550 SMIM24O75264 130 aa20.77■□□□□ 0.92
YBX3-202ENST00000279550 CD1EP15812 388 aa20.77■□□□□ 0.92
YBX3-202ENST00000279550 TSPAN8P19075 237 aa20.77■□□□□ 0.92
YBX3-202ENST00000279550 CCNHP51946 323 aaPredicted RBP20.77■□□□□ 0.92
YBX3-202ENST00000279550 LEXMQ3ZCV2 418 aa20.77■□□□□ 0.92
YBX3-202ENST00000279550 PREPLQ4J6C6 727 aaPredicted RBP20.77■□□□□ 0.92
YBX3-202ENST00000279550 Q6ZVU0 165 aa20.77■□□□□ 0.92
YBX3-202ENST00000279550 SFTPA1Q8IWL2 248 aa20.77■□□□□ 0.92
YBX3-202ENST00000279550 CHST14Q8NCH0 376 aa20.77■□□□□ 0.92
YBX3-202ENST00000279550 GRIN3AQ8TCU5 1115 aa20.77■□□□□ 0.92
YBX3-202ENST00000279550 CD200R1Q8TD46 325 aa20.77■□□□□ 0.92
YBX3-202ENST00000279550 FRS2Q8WU20 508 aa20.77■□□□□ 0.92
YBX3-202ENST00000279550 NAT14Q8WUY8 206 aa20.77■□□□□ 0.92
YBX3-202ENST00000279550 SYTL2Q9HCH5 934 aa20.77■□□□□ 0.92
YBX3-202ENST00000279550 CD248Q9HCU0 757 aa20.77■□□□□ 0.92
YBX3-202ENST00000279550 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.77■□□□□ 0.925e-6■■■□□ 16.5
YBX3-202ENST00000279550 PLA2G4CQ9UP65 541 aa20.77■□□□□ 0.92
YBX3-202ENST00000279550 SLC8A2Q9UPR5 921 aa20.77■□□□□ 0.92
YBX3-202ENST00000279550 ZNF106Q9H2Y7 1883 aaKnown RBP20.77■□□□□ 0.92
YBX3-202ENST00000279550 TBC1D3BA6NDS4 549 aa20.76■□□□□ 0.91
YBX3-202ENST00000279550 NPEPPSL1A6NEC2 478 aa20.76■□□□□ 0.91
YBX3-202ENST00000279550 SLCO1B7G3V0H7 640 aa20.76■□□□□ 0.91
YBX3-202ENST00000279550 CDC7O00311 574 aa20.76■□□□□ 0.91
YBX3-202ENST00000279550 SDHDO14521 159 aa20.76■□□□□ 0.91
YBX3-202ENST00000279550 VPS26AO75436 327 aa20.76■□□□□ 0.91
YBX3-202ENST00000279550 TSPAN12O95859 305 aa20.76■□□□□ 0.91
YBX3-202ENST00000279550 BPIP17213 487 aa20.76■□□□□ 0.91
YBX3-202ENST00000279550 GM2AP17900 193 aa20.76■□□□□ 0.91
YBX3-202ENST00000279550 PTGER3P43115 390 aa20.76■□□□□ 0.91
YBX3-202ENST00000279550 SOX9P48436 509 aa20.76■□□□□ 0.91
YBX3-202ENST00000279550 RAD51Q06609 339 aa20.76■□□□□ 0.91
YBX3-202ENST00000279550 CARD16Q5EG05 197 aa20.76■□□□□ 0.91
YBX3-202ENST00000279550 DPY19L3Q6ZPD9 716 aa20.76■□□□□ 0.91
YBX3-202ENST00000279550 CUZD1Q86UP6 607 aa20.76■□□□□ 0.91
YBX3-202ENST00000279550 RHEBL1Q8TAI7 183 aa20.76■□□□□ 0.91
YBX3-202ENST00000279550 KIAA1191Q96A73 305 aa20.76■□□□□ 0.91
YBX3-202ENST00000279550 ECHDC3Q96DC8 303 aa20.76■□□□□ 0.91
YBX3-202ENST00000279550 ZDHHC6Q9H6R6 413 aa20.76■□□□□ 0.91
YBX3-202ENST00000279550 IL26Q9NPH9 171 aa20.76■□□□□ 0.91
YBX3-202ENST00000279550 G3BP2Q9UN86 482 aaKnown RBP20.76■□□□□ 0.91
YBX3-202ENST00000279550 FIS1Q9Y3D6 152 aa20.76■□□□□ 0.91
YBX3-202ENST00000279550 IQCF5A8MTL0 148 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 TTC34A8MYJ7 566 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 KAT7O95251 611 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 SIX3O95343 332 aaPredicted RBP20.75■□□□□ 0.91
YBX3-202ENST00000279550 PRAMEF1O95521 474 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 ST8SIA6P61647 398 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 KLF10Q13118 480 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 NAA25Q14CX7 972 aa20.75■□□□□ 0.91
YBX3-202ENST00000279550 TSNQ15631 228 aaKnown RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms