RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 TRNP1Q6NT89 227 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 SLFN11Q7Z7L1 901 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 CLEC14AQ86T13 490 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 ZNF354CQ86Y25 554 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 EMC1Q8N766 993 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 ARL10Q8N8L6 244 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 RTL3Q8N8U3 475 aaKnown RBP9.73□□□□□ -0.85
LRTM1-201ENST00000273286 NAF1Q96HR8 494 aaKnown RBP9.73□□□□□ -0.85
LRTM1-201ENST00000273286 KLHL32Q96NJ5 620 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 LRRC61Q9BV99 259 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 STRADBQ9C0K7 418 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 CLSTN2Q9H4D0 955 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 CATSPERBQ9H7T0 1116 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 NTMQ9P121 344 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 NOCTQ9UK39 431 aaKnown RBP9.73□□□□□ -0.85
LRTM1-201ENST00000273286 PADI4Q9UM07 663 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 ENTPD2Q9Y5L3 495 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 MGAQ8IWI9 3026 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 CFAP46Q8IYW2 2715 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 ASH1LQ9NR48 2969 aaKnown RBP9.73□□□□□ -0.85
LRTM1-201ENST00000273286 CFAP69A5D8W1 941 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 EIF3CLB5ME19 914 aaKnown RBP9.73□□□□□ -0.85
LRTM1-201ENST00000273286 K7ENP7 123 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 MUSKO15146 869 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 TBX1O43435 398 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 TMCC1O94876 653 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 RASGRP1O95267 797 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 CTSEP14091 401 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 EPHB2P29323 1055 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 SOX5P35711 763 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 IGFALSP35858 605 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 HK3P52790 923 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 ADKP55263 362 aaKnown RBP9.73□□□□□ -0.85
LRTM1-201ENST00000273286 HDAC4P56524 1084 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 SYCP1Q15431 976 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 C15orf59Q2T9L4 293 aaPredicted RBP9.73□□□□□ -0.85
LRTM1-201ENST00000273286 DPCR1Q3MIW9 517 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 C2CD6Q53TS8 623 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 CFAP58Q5T655 872 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 ARHGAP40Q5TG30 622 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 PPP1R2P3Q6NXS1 205 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 ERAP2Q6P179 960 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 INO80CQ6PI98 192 aaPredicted RBP9.73□□□□□ -0.85
LRTM1-201ENST00000273286 BRAT1Q6PJG6 821 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 VPS36Q86VN1 386 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 GKN2Q86XP6 184 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 DNAAF5Q86Y56 855 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 SLC35F3Q8IY50 421 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 C3orf20Q8ND61 904 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 OR6K2Q8NGY2 324 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 FAM172AQ8WUF8 416 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 TMEM159Q96B96 161 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 ATXN7L3BQ96GX2 97 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 ZNF641Q96N77 438 aaPredicted RBP9.73□□□□□ -0.85
LRTM1-201ENST00000273286 TUBGCP5Q96RT8 1024 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 EIF3CQ99613 913 aaKnown RBP9.73□□□□□ -0.85
LRTM1-201ENST00000273286 NCAPGQ9BPX3 1015 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 C11orf70Q9BRQ4 267 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 SELENOOQ9BVL4 669 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 NEU3Q9UQ49 428 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 ITM2BQ9Y287 266 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 PCDHGA7Q9Y5G6 932 aa9.73□□□□□ -0.85
LRTM1-201ENST00000273286 SETXQ7Z333 2677 aaKnown RBP9.72□□□□□ -0.85
LRTM1-201ENST00000273286 RP1P56715 2156 aa9.72□□□□□ -0.85
LRTM1-201ENST00000273286 TSPAN11A1L157 253 aa9.72□□□□□ -0.85
LRTM1-201ENST00000273286 J3QKU1 62 aa9.72□□□□□ -0.85
LRTM1-201ENST00000273286 PLD2O14939 933 aa9.72□□□□□ -0.85
LRTM1-201ENST00000273286 YY2O15391 372 aa9.72□□□□□ -0.85
LRTM1-201ENST00000273286 GCATO75600 419 aa9.72□□□□□ -0.85
LRTM1-201ENST00000273286 GFPT2O94808 682 aa9.72□□□□□ -0.85
LRTM1-201ENST00000273286 UNGP13051 313 aaPredicted RBP9.72□□□□□ -0.85
LRTM1-201ENST00000273286 C6P13671 934 aa9.72□□□□□ -0.85
LRTM1-201ENST00000273286 TSHRP16473 764 aa9.72□□□□□ -0.85
LRTM1-201ENST00000273286 GPD1P21695 349 aa9.72□□□□□ -0.85
LRTM1-201ENST00000273286 KELP23276 732 aa9.72□□□□□ -0.85
LRTM1-201ENST00000273286 FPR2P25090 351 aa9.72□□□□□ -0.85
LRTM1-201ENST00000273286 STAT1P42224 750 aa9.72□□□□□ -0.85
LRTM1-201ENST00000273286 FMO1Q01740 532 aa9.72□□□□□ -0.85
LRTM1-201ENST00000273286 PLP2Q04941 152 aa9.72□□□□□ -0.85
LRTM1-201ENST00000273286 KLHL40Q2TBA0 621 aa9.72□□□□□ -0.85
LRTM1-201ENST00000273286 TMEM52BQ4KMG9 183 aa9.72□□□□□ -0.85
LRTM1-201ENST00000273286 ETV3LQ6ZN32 361 aa9.72□□□□□ -0.85
LRTM1-201ENST00000273286 ZNF227Q86WZ6 799 aa9.72□□□□□ -0.85
LRTM1-201ENST00000273286 PHF13Q86YI8 300 aaPredicted RBP9.72□□□□□ -0.85
LRTM1-201ENST00000273286 RBFAQ8N0V3 343 aa9.72□□□□□ -0.85
LRTM1-201ENST00000273286 UMODL1-AS1Q8N2C9 162 aa9.72□□□□□ -0.85
LRTM1-201ENST00000273286 ANKRD20A12PQ8NF67 263 aa9.72□□□□□ -0.85
LRTM1-201ENST00000273286 GPT2Q8TD30 523 aa9.72□□□□□ -0.85
LRTM1-201ENST00000273286 GFM1Q96RP9 751 aaKnown RBP9.72□□□□□ -0.85
LRTM1-201ENST00000273286 CCDC3Q9BQI4 270 aa9.72□□□□□ -0.85
LRTM1-201ENST00000273286 EDEM3Q9BZQ6 932 aa9.72□□□□□ -0.85
LRTM1-201ENST00000273286 NUP62CLQ9H1M0 184 aa9.72□□□□□ -0.85
LRTM1-201ENST00000273286 CPNE5Q9HCH3 593 aa9.72□□□□□ -0.85
LRTM1-201ENST00000273286 ADAM22Q9P0K1 906 aa9.72□□□□□ -0.85
LRTM1-201ENST00000273286 AHCTF1Q8WYP5 2266 aa9.71□□□□□ -0.86
LRTM1-201ENST00000273286 SIGLEC16A6NMB1 481 aa9.71□□□□□ -0.86
LRTM1-201ENST00000273286 FAM72CH0Y354 149 aa9.71□□□□□ -0.86
LRTM1-201ENST00000273286 NTN3O00634 580 aaPredicted RBP9.71□□□□□ -0.86
LRTM1-201ENST00000273286 ZW10O43264 779 aa9.71□□□□□ -0.86
LRTM1-201ENST00000273286 SUSD5O60279 629 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms