RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 DEAF1O75398 565 aaPredicted RBP16.17■□□□□ 0.18
CTCF-201ENST00000264010 PEX2P28328 305 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 NNMTP40261 264 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 RPL5P46777 297 aaKnown RBP16.17■□□□□ 0.18
CTCF-201ENST00000264010 ATP6AP1LQ52LC2 224 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 LDLRAP1Q5SW96 308 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 REP15Q6BDI9 236 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 CPSF7Q8N684 471 aaKnown RBP16.17■□□□□ 0.18
CTCF-201ENST00000264010 DCUN1D1Q96GG9 259 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 ASB8Q9H765 288 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 NLE1Q9NVX2 485 aaPredicted RBP16.17■□□□□ 0.18
CTCF-201ENST00000264010 TUBA8Q9NY65 449 aaPredicted RBP16.17■□□□□ 0.18
CTCF-201ENST00000264010 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.17■□□□□ 0.18
CTCF-201ENST00000264010 CARNS1A5YM72 827 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 ZNF840PA6NDX5 716 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 PRMT5O14744 637 aaPredicted RBP16.17■□□□□ 0.18
CTCF-201ENST00000264010 COCHO43405 550 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 FAM58BPP0C7Q3 252 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 XRCC1P18887 633 aaPredicted RBP16.17■□□□□ 0.18
CTCF-201ENST00000264010 ARNTP27540 789 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 ZNF678Q5SXM1 525 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 GPRIN3Q6ZVF9 776 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 FNDC5Q8NAU1 212 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 MYO19Q96H55 970 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 CEP295NLQ96MC4 621 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 DACH2Q96NX9 599 aa16.17■□□□□ 0.18
CTCF-201ENST00000264010 A0A0J9YYE9 177 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 CAPN8A6NHC0 703 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 FAM155AB1AL88 458 aaPredicted RBP16.16■□□□□ 0.18
CTCF-201ENST00000264010 H3BMM5 538 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 B4GALT3O60512 393 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 SEMA3DO95025 777 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 SIX3O95343 332 aaPredicted RBP16.16■□□□□ 0.18
CTCF-201ENST00000264010 IDO1P14902 403 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 PSMA4P25789 261 aaKnown RBP16.16■□□□□ 0.18
CTCF-201ENST00000264010 CHN2P52757 468 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 ZNF461Q8TAF7 563 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 SEMA6AQ9H2E6 1030 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 CREBZFQ9NS37 354 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 SPG21Q9NZD8 308 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 POLG2Q9UHN1 485 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 M0R3G1 203 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 LDB2O43679 373 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 KERAO60938 352 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 HIST1H2AGP0C0S8 130 aaPredicted RBP16.16■□□□□ 0.18
CTCF-201ENST00000264010 HIST1H2ADP20671 130 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 SLC7A2P52569 658 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 NKX3-2P78367 333 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 NR6A1Q15406 480 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 CCSAPQ6IQ19 270 aaPredicted RBP16.16■□□□□ 0.18
CTCF-201ENST00000264010 ADAMTSL2Q86TH1 951 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 ADCK1Q86TW2 530 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 HIST1H2AHQ96KK5 128 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 HIST1H2AJQ99878 128 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 H2AFJQ9BTM1 129 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 CARD8Q9Y2G2 431 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 CCNIQ14094 377 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 EGFLAMQ63HQ2 1017 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 CERS6Q6ZMG9 384 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 GALNT7Q86SF2 657 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 ANKRD49Q8WVL7 239 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 LINC01599Q8WXQ3 324 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 CEP19Q96LK0 163 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 POLR3BQ9NW08 1133 aaPredicted RBP16.16■□□□□ 0.18
CTCF-201ENST00000264010 MTRRQ9UBK8 725 aa16.16■□□□□ 0.18
CTCF-201ENST00000264010 CAB39Q9Y376 341 aaPredicted RBP16.16■□□□□ 0.18
CTCF-201ENST00000264010 PIP5K1BO14986 540 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 ZSCAN9O15535 394 aaPredicted RBP16.15■□□□□ 0.18
CTCF-201ENST00000264010 ZNF37AP17032 561 aaPredicted RBP16.15■□□□□ 0.18
CTCF-201ENST00000264010 FDXRP22570 491 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 SERPINA4P29622 427 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 PTGER3P43115 390 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 NUP107P57740 925 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 MBTPS1Q14703 1052 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 NR1D2Q14995 579 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 PNPLA1Q8N8W4 532 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 ADCY4Q8NFM4 1077 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 TMEM79Q9BSE2 394 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 GNPTGQ9UJJ9 305 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 RIMKLBQ9ULI2 386 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 PCDHB1Q9Y5F3 818 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 ESR1P03372 595 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 CD1DP15813 335 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 AKT1P31749 480 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 ARRB2P32121 409 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 AP1S1P61966 158 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 CACNG1Q06432 222 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 ARHGEF7Q14155 803 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 SPIDRQ14159 915 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 FUT11Q495W5 492 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 C6orf10Q5SRN2 563 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 HHIPL1Q96JK4 782 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 FAM126AQ9BYI3 521 aaPredicted RBP16.15■□□□□ 0.18
CTCF-201ENST00000264010 ATP13A3Q9H7F0 1226 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 BACE2Q9Y5Z0 518 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 ANKRD66B4E2M5 251 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 PITPNM1O00562 1244 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 DGKAP23743 735 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 TPGS1Q6ZTW0 290 aa16.15■□□□□ 0.18
CTCF-201ENST00000264010 DNAJB7Q7Z6W7 309 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms