RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 CPSF2Q9P2I0 782 aaKnown RBP22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 GALPQ9UBC7 116 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 GNPTGQ9UJJ9 305 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 FADS3Q9Y5Q0 445 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 PRSS21Q9Y6M0 314 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 KLF8O95600 359 aaPredicted RBP22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 FGF3P11487 239 aaPredicted RBP22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 RPS14P62263 151 aaKnown RBP22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 TDGQ13569 410 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 STARD3Q14849 445 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 ACAP2Q15057 778 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 CES4AQ5XG92 561 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 PAQR3Q6TCH7 311 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 ZYG11AQ6WRX3 759 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 MACC1Q6ZN28 852 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 CD200R1Q8TD46 325 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 COPS8Q99627 209 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 SLC30A3Q99726 388 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 PITPNM3Q9BZ71 974 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 UNKQ9C0B0 810 aaKnown RBP22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 CD248Q9HCU0 757 aa22.68■■□□□ 1.22
SMARCB1-201ENST00000263121 LRRK1Q38SD2 2015 aa22.67■■□□□ 1.22
SMARCB1-201ENST00000263121 A0A1W2PQF6 199 aa22.67■■□□□ 1.22
SMARCB1-201ENST00000263121 H3BMM5 538 aa22.67■■□□□ 1.22
SMARCB1-201ENST00000263121 SKIV2L2P42285 1042 aaKnown RBP22.67■■□□□ 1.22
SMARCB1-201ENST00000263121 NSG1P42857 185 aa22.67■■□□□ 1.22
SMARCB1-201ENST00000263121 B4GALNT1Q00973 533 aa22.67■■□□□ 1.22
SMARCB1-201ENST00000263121 GPRC6AQ5T6X5 926 aa22.67■■□□□ 1.22
SMARCB1-201ENST00000263121 AGBL4Q5VU57 503 aa22.67■■□□□ 1.22
SMARCB1-201ENST00000263121 ATG16L1Q676U5 607 aa22.67■■□□□ 1.22
SMARCB1-201ENST00000263121 PTRHD1Q6GMV3 140 aaKnown RBP22.67■■□□□ 1.22
SMARCB1-201ENST00000263121 CGB2Q6NT52 195 aa22.67■■□□□ 1.22
SMARCB1-201ENST00000263121 KLC3Q6P597 504 aa22.67■■□□□ 1.22
SMARCB1-201ENST00000263121 PIGWQ7Z7B1 504 aa22.67■■□□□ 1.22
SMARCB1-201ENST00000263121 TXNDC5Q8NBS9 432 aaKnown RBP22.67■■□□□ 1.22
SMARCB1-201ENST00000263121 GIMAP7Q8NHV1 300 aa22.67■■□□□ 1.22
SMARCB1-201ENST00000263121 TRMT6Q9UJA5 497 aaKnown RBP22.67■■□□□ 1.22
SMARCB1-201ENST00000263121 FADS2P1A8MWK0 482 aa22.66■■□□□ 1.22
SMARCB1-201ENST00000263121 LOC730098B7Z3J9 87 aa22.66■■□□□ 1.22
SMARCB1-201ENST00000263121 E5RI56 91 aa22.66■■□□□ 1.22
SMARCB1-201ENST00000263121 AP1G1O43747 822 aa22.66■■□□□ 1.22
SMARCB1-201ENST00000263121 MYL2P10916 166 aa22.66■■□□□ 1.22
SMARCB1-201ENST00000263121 C6P13671 934 aa22.66■■□□□ 1.22
SMARCB1-201ENST00000263121 HOXB2P14652 356 aa22.66■■□□□ 1.22
SMARCB1-201ENST00000263121 CD1DP15813 335 aa22.66■■□□□ 1.22
SMARCB1-201ENST00000263121 CLCN7P51798 805 aa22.66■■□□□ 1.22
SMARCB1-201ENST00000263121 BST1Q10588 318 aa22.66■■□□□ 1.22
SMARCB1-201ENST00000263121 ZNF284Q2VY69 593 aa22.66■■□□□ 1.22
SMARCB1-201ENST00000263121 ZNF765Q7L2R6 523 aa22.66■■□□□ 1.22
SMARCB1-201ENST00000263121 CLDN19Q8N6F1 224 aa22.66■■□□□ 1.22
SMARCB1-201ENST00000263121 SIDT2Q8NBJ9 832 aaKnown RBP22.66■■□□□ 1.22
SMARCB1-201ENST00000263121 OR6Y1Q8NGX8 325 aa22.66■■□□□ 1.22
SMARCB1-201ENST00000263121 IQCF5A8MTL0 148 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 NEMP1O14524 444 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 RBP1P09455 135 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 IL9P15248 144 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 CHRM3P20309 590 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 COL9A1P20849 921 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 TAS2R38P59533 333 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 PUS10Q3MIT2 529 aaKnown RBP22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 SLC44A4Q53GD3 710 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 UGT3A1Q6NUS8 523 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 OTOAQ7RTW8 1153 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 CACUL1Q86Y37 369 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 FAM3CQ92520 227 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 AP2M1Q96CW1 435 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 VPS35Q96QK1 796 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 TSSK1BQ9BXA7 367 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 DERL2Q9GZP9 239 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 MKRN2Q9H000 416 aaKnown RBP22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 OXSMQ9NWU1 459 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 COQ6Q9Y2Z9 468 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 DHRS7Q9Y394 339 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 MYO10Q9HD67 2058 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 MMP20O60882 483 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 SNNO75324 88 aaPredicted RBP22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 RECQL5O94762 991 aaPredicted RBP22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 TFEBP19484 476 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 CCINQ13939 588 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 FBXO43Q4G163 708 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 ZCCHC23Q6ZST2 131 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 ISCA2Q86U28 154 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 HDDC3Q8N4P3 179 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 NKAPQ8N5F7 415 aaKnown RBP22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 DDHD1Q8NEL9 900 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 LKAAEAR1Q8TD35 194 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 FAM131CQ96AQ9 280 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 GRAMD1AQ96CP6 724 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 ELAC2Q9BQ52 826 aaKnown RBP22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 SERGEFQ9UGK8 458 aa22.65■■□□□ 1.22
SMARCB1-201ENST00000263121 F5P12259 2224 aa22.64■■□□□ 1.22
SMARCB1-201ENST00000263121 ZBTB14O43829 449 aa22.64■■□□□ 1.21
SMARCB1-201ENST00000263121 SNX3O60493 162 aa22.64■■□□□ 1.21
SMARCB1-201ENST00000263121 TSPAN12O95859 305 aa22.64■■□□□ 1.21
SMARCB1-201ENST00000263121 SERPINE1P05121 402 aa22.64■■□□□ 1.21
SMARCB1-201ENST00000263121 C7P10643 843 aa22.64■■□□□ 1.21
SMARCB1-201ENST00000263121 RALBP11234 206 aa22.64■■□□□ 1.21
SMARCB1-201ENST00000263121 GKAP1Q5VSY0 366 aaPredicted RBP22.64■■□□□ 1.21
SMARCB1-201ENST00000263121 CXorf40AQ8TE69 158 aa22.64■■□□□ 1.21
SMARCB1-201ENST00000263121 NAT14Q8WUY8 206 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms