RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 ACVR1CQ8NER5 493 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 SLC44A1Q8WWI5 657 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 CRLS1Q9UJA2 301 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 CRYL1Q9Y2S2 319 aa27.26■■□□□ 1.95
SMARCD3-201ENST00000262188 SKAP2O75563 359 aaPredicted RBP27.25■■□□□ 1.95
SMARCD3-201ENST00000262188 ATP6V1G2O95670 118 aa27.25■■□□□ 1.95
SMARCD3-201ENST00000262188 IGHV4-34P06331 123 aa27.25■■□□□ 1.95
SMARCD3-201ENST00000262188 MSH2P43246 934 aa27.25■■□□□ 1.95
SMARCD3-201ENST00000262188 IFT88Q13099 833 aa27.25■■□□□ 1.95
SMARCD3-201ENST00000262188 BMPR2Q13873 1038 aa27.25■■□□□ 1.95
SMARCD3-201ENST00000262188 DBN1Q16643 649 aa27.25■■□□□ 1.95
SMARCD3-201ENST00000262188 PACS1Q6VY07 963 aa27.25■■□□□ 1.95
SMARCD3-201ENST00000262188 TEX9Q8N6V9 391 aa27.25■■□□□ 1.95
SMARCD3-201ENST00000262188 TP53I13Q8NBR0 393 aaPredicted RBP27.25■■□□□ 1.95
SMARCD3-201ENST00000262188 LENG8Q96PV6 779 aaPredicted RBP27.25■■□□□ 1.95
SMARCD3-201ENST00000262188 KLF6Q99612 283 aaPredicted RBP27.25■■□□□ 1.95
SMARCD3-201ENST00000262188 KDM4CQ9H3R0 1056 aa27.25■■□□□ 1.95
SMARCD3-201ENST00000262188 C11orf16Q9NQ32 467 aa27.25■■□□□ 1.95
SMARCD3-201ENST00000262188 SLCO1B1Q9Y6L6 691 aa27.25■■□□□ 1.95
SMARCD3-201ENST00000262188 ABCA7Q8IZY2 2146 aa27.25■■□□□ 1.95
SMARCD3-201ENST00000262188 S1PR4O95977 384 aa27.24■■□□□ 1.95
SMARCD3-201ENST00000262188 OXTRP30559 389 aa27.24■■□□□ 1.95
SMARCD3-201ENST00000262188 BLMHQ13867 455 aa27.24■■□□□ 1.95
SMARCD3-201ENST00000262188 KHDC1Q4VXA5 237 aaKnown RBP27.24■■□□□ 1.95
SMARCD3-201ENST00000262188 MRNIPQ6NTE8 343 aa27.24■■□□□ 1.95
SMARCD3-201ENST00000262188 TRAM1L1Q8N609 369 aa27.24■■□□□ 1.95
SMARCD3-201ENST00000262188 GPR150Q8NGU9 434 aa27.24■■□□□ 1.95
SMARCD3-201ENST00000262188 BIRC7Q96CA5 298 aa27.24■■□□□ 1.95
SMARCD3-201ENST00000262188 COL25A1Q9BXS0 654 aaPredicted RBP27.24■■□□□ 1.95
SMARCD3-201ENST00000262188 RGSL1A5PLK6 1076 aa27.24■■□□□ 1.95
SMARCD3-201ENST00000262188 A6NHS1 94 aa27.24■■□□□ 1.95
SMARCD3-201ENST00000262188 GPR37L1O60883 481 aa27.24■■□□□ 1.95
SMARCD3-201ENST00000262188 PMLP29590 882 aa27.24■■□□□ 1.95
SMARCD3-201ENST00000262188 GPR1P46091 355 aa27.24■■□□□ 1.95
SMARCD3-201ENST00000262188 CLDN2P57739 230 aa27.24■■□□□ 1.95
SMARCD3-201ENST00000262188 LRRC14Q15048 493 aa27.24■■□□□ 1.95
SMARCD3-201ENST00000262188 KRT71Q3SY84 523 aa27.24■■□□□ 1.95
SMARCD3-201ENST00000262188 CYP4X1Q8N118 509 aa27.24■■□□□ 1.95
SMARCD3-201ENST00000262188 ARFGAP2Q8N6H7 521 aa27.24■■□□□ 1.95
SMARCD3-201ENST00000262188 CCDC77Q9BR77 488 aa27.24■■□□□ 1.95
SMARCD3-201ENST00000262188 RASGRF2O14827 1237 aa27.23■■□□□ 1.95
SMARCD3-201ENST00000262188 RPSAP08865 295 aaKnown RBP27.23■■□□□ 1.95
SMARCD3-201ENST00000262188 ZDHHC20Q5W0Z9 365 aa27.23■■□□□ 1.95
SMARCD3-201ENST00000262188 NEK5Q6P3R8 708 aa27.23■■□□□ 1.95
SMARCD3-201ENST00000262188 TRIM69Q86WT6 500 aa27.23■■□□□ 1.95
SMARCD3-201ENST00000262188 CALML6Q8TD86 181 aa27.23■■□□□ 1.95
SMARCD3-201ENST00000262188 SNX19Q92543 992 aa27.23■■□□□ 1.95
SMARCD3-201ENST00000262188 CENPTQ96BT3 561 aa27.23■■□□□ 1.95
SMARCD3-201ENST00000262188 C19orf43Q9BQ61 176 aa27.23■■□□□ 1.95
SMARCD3-201ENST00000262188 DHRS4Q9BTZ2 278 aa27.23■■□□□ 1.95
SMARCD3-201ENST00000262188 ZSCAN5AQ9BUG6 496 aa27.23■■□□□ 1.95
SMARCD3-201ENST00000262188 NFKBIL1Q9UBC1 381 aaPredicted RBP27.23■■□□□ 1.95
SMARCD3-201ENST00000262188 CNOT6Q9ULM6 557 aaKnown RBP27.23■■□□□ 1.95
SMARCD3-201ENST00000262188 OR1A2Q9Y585 309 aa27.23■■□□□ 1.95
SMARCD3-201ENST00000262188 TRBV5-4A0A0C4DH59 114 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 ENO4A6NNW6 628 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 H0Y8X5 98 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 TNFRSF10AO00220 468 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 INHBAP08476 426 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 IGFALSP35858 605 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 CD151P48509 253 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 INPP5AQ14642 412 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 KIAA0895LQ68EN5 471 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 NXPE1Q8N323 547 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 GDAP1Q8TB36 358 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 FAM81AQ8TBF8 368 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 NDNQ99608 321 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 GON4LQ3T8J9 2241 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 UBA6A0AVT1 1052 aaPredicted RBP27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 GOLGA6L10A6NI86 522 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 C10orf142B7Z368 130 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 NDUFS2O75306 463 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 ACRV1P26436 265 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 PTPN5P54829 565 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 TMED2Q15363 201 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 TYSND1Q2T9J0 566 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 GPRC6AQ5T6X5 926 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 PNCKQ6P2M8 343 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 ZNF449Q6P9G9 518 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 ZNF765Q7L2R6 523 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 SLC26A11Q86WA9 606 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 LGR4Q9BXB1 951 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 RAD18Q9NS91 495 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 NOP53Q9NZM5 478 aaKnown RBP27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 TXNDC16Q9P2K2 825 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 PCDHGA4Q9Y5G9 962 aa27.22■■□□□ 1.95
SMARCD3-201ENST00000262188 HMX2A2RU54 273 aa27.21■■□□□ 1.95
SMARCD3-201ENST00000262188 AVPR2P30518 371 aa27.21■■□□□ 1.95
SMARCD3-201ENST00000262188 B4GALNT1Q00973 533 aa27.21■■□□□ 1.95
SMARCD3-201ENST00000262188 RPL6Q02878 288 aaKnown RBP27.21■■□□□ 1.95
SMARCD3-201ENST00000262188 DPTQ07507 201 aa27.21■■□□□ 1.95
SMARCD3-201ENST00000262188 ITGA9Q13797 1035 aa27.21■■□□□ 1.95
SMARCD3-201ENST00000262188 USP39Q53GS9 565 aaKnown RBP27.21■■□□□ 1.95
SMARCD3-201ENST00000262188 LRIG3Q6UXM1 1119 aa27.21■■□□□ 1.95
SMARCD3-201ENST00000262188 GALNT15Q8N3T1 639 aa27.21■■□□□ 1.95
SMARCD3-201ENST00000262188 FAM136AQ96C01 138 aa27.21■■□□□ 1.95
SMARCD3-201ENST00000262188 CPNE1Q99829 537 aa27.21■■□□□ 1.95
SMARCD3-201ENST00000262188 PRSS21Q9Y6M0 314 aa27.21■■□□□ 1.95
SMARCD3-201ENST00000262188 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa27.2■■□□□ 1.95
SMARCD3-201ENST00000262188 AGAP14A8MT82 685 aa27.2■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms