RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 RABGEF1Q9UJ41 708 aa13.28□□□□□ -0.28
SGCA-201ENST00000262018 ANAPC2Q9UJX6 822 aa13.28□□□□□ -0.28
SGCA-201ENST00000262018 CHMP2BQ9UQN3 213 aa13.28□□□□□ -0.28
SGCA-201ENST00000262018 CACNA1DQ01668 2161 aa13.27□□□□□ -0.29
SGCA-201ENST00000262018 SMIM23A6NLE4 172 aa13.27□□□□□ -0.29
SGCA-201ENST00000262018 PSMD3O43242 534 aa13.27□□□□□ -0.29
SGCA-201ENST00000262018 AP2A1O95782 977 aa13.27□□□□□ -0.29
SGCA-201ENST00000262018 NFKB1P19838 968 aa13.27□□□□□ -0.29
SGCA-201ENST00000262018 SSTR1P30872 391 aa13.27□□□□□ -0.29
SGCA-201ENST00000262018 NNMTP40261 264 aa13.27□□□□□ -0.29
SGCA-201ENST00000262018 SLCO1A2P46721 670 aa13.27□□□□□ -0.29
SGCA-201ENST00000262018 KCNAB2Q13303 367 aa13.27□□□□□ -0.29
SGCA-201ENST00000262018 EIF3IQ13347 325 aaKnown RBP13.27□□□□□ -0.29
SGCA-201ENST00000262018 PARP15Q460N3 678 aa13.27□□□□□ -0.29
SGCA-201ENST00000262018 KCTD11Q693B1 232 aa13.27□□□□□ -0.29
SGCA-201ENST00000262018 CXorf57Q6NSI4 855 aaKnown RBP13.27□□□□□ -0.29
SGCA-201ENST00000262018 ZNF783Q6ZMS7 281 aa13.27□□□□□ -0.29
SGCA-201ENST00000262018 GCNT7Q6ZNI0 430 aa13.27□□□□□ -0.29
SGCA-201ENST00000262018 Q6ZSR6 202 aa13.27□□□□□ -0.29
SGCA-201ENST00000262018 C3orf62Q6ZUJ4 267 aa13.27□□□□□ -0.29
SGCA-201ENST00000262018 PTAR1Q7Z6K3 402 aaPredicted RBP13.27□□□□□ -0.29
SGCA-201ENST00000262018 B3GNT8Q7Z7M8 397 aa13.27□□□□□ -0.29
SGCA-201ENST00000262018 ZFAND4Q86XD8 727 aa13.27□□□□□ -0.29
SGCA-201ENST00000262018 APCDD1Q8J025 514 aa13.27□□□□□ -0.29
SGCA-201ENST00000262018 OR8D1Q8WZ84 308 aa13.27□□□□□ -0.29
SGCA-201ENST00000262018 HMCESQ96FZ2 354 aa13.27□□□□□ -0.29
SGCA-201ENST00000262018 AGAP3Q96P47 875 aa13.27□□□□□ -0.29
SGCA-201ENST00000262018 FCRL5Q96RD9 977 aa13.27□□□□□ -0.29
SGCA-201ENST00000262018 CCDC3Q9BQI4 270 aa13.27□□□□□ -0.29
SGCA-201ENST00000262018 ACSS3Q9H6R3 686 aa13.27□□□□□ -0.29
SGCA-201ENST00000262018 GLOD4Q9HC38 313 aa13.27□□□□□ -0.29
SGCA-201ENST00000262018 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.27□□□□□ -0.29
SGCA-201ENST00000262018 SLC24A2Q9UI40 661 aa13.27□□□□□ -0.29
SGCA-201ENST00000262018 PCDHB11Q9Y5F2 797 aa13.27□□□□□ -0.29
SGCA-201ENST00000262018 CSNK1G3Q9Y6M4 447 aa13.27□□□□□ -0.29
SGCA-201ENST00000262018 ITPR2Q14571 2701 aa13.27□□□□□ -0.29
SGCA-201ENST00000262018 EXOC1LA0A1B0GW35 172 aa13.26□□□□□ -0.29
SGCA-201ENST00000262018 F5H423 210 aaPredicted RBP13.26□□□□□ -0.29
SGCA-201ENST00000262018 H3BM21 787 aa13.26□□□□□ -0.29
SGCA-201ENST00000262018 AQP9O43315 295 aa13.26□□□□□ -0.29
SGCA-201ENST00000262018 RAMP2O60895 175 aa13.26□□□□□ -0.29
SGCA-201ENST00000262018 CDH16O75309 829 aa13.26□□□□□ -0.29
SGCA-201ENST00000262018 PEX11BO96011 259 aa13.26□□□□□ -0.29
SGCA-201ENST00000262018 RHOCP08134 193 aa13.26□□□□□ -0.29
SGCA-201ENST00000262018 JMJD7P0C870 316 aa13.26□□□□□ -0.29
SGCA-201ENST00000262018 HNRNPA2B1P22626 353 aaKnown RBP13.26□□□□□ -0.29
SGCA-201ENST00000262018 GCAP28676 217 aa13.26□□□□□ -0.29
SGCA-201ENST00000262018 ATP5DP30049 168 aa13.26□□□□□ -0.29
SGCA-201ENST00000262018 GRIA1P42261 906 aa13.26□□□□□ -0.29
SGCA-201ENST00000262018 RPIAP49247 311 aa13.26□□□□□ -0.29
SGCA-201ENST00000262018 TAS2R38P59533 333 aa13.26□□□□□ -0.29
SGCA-201ENST00000262018 MAGOHP61326 146 aaKnown RBP13.26□□□□□ -0.29
SGCA-201ENST00000262018 MTM1Q13496 603 aa13.26□□□□□ -0.29
SGCA-201ENST00000262018 PRPSAP1Q14558 356 aa13.26□□□□□ -0.29
SGCA-201ENST00000262018 POLD3Q15054 466 aaPredicted RBP13.26□□□□□ -0.29
SGCA-201ENST00000262018 ZNF284Q2VY69 593 aa13.26□□□□□ -0.29
SGCA-201ENST00000262018 BORAQ6PGQ7 559 aa13.26□□□□□ -0.29
SGCA-201ENST00000262018 CAPN12Q6ZSI9 719 aa13.26□□□□□ -0.29
SGCA-201ENST00000262018 CNPY4Q8N129 248 aa13.26□□□□□ -0.29
SGCA-201ENST00000262018 LMX1AQ8TE12 382 aa13.26□□□□□ -0.29
SGCA-201ENST00000262018 GLMNQ92990 594 aa13.26□□□□□ -0.29
SGCA-201ENST00000262018 NAT6Q93015 286 aa13.26□□□□□ -0.29
SGCA-201ENST00000262018 PPP1R2P1Q96PQ5 205 aa13.26□□□□□ -0.29
SGCA-201ENST00000262018 EBNA1BP2Q99848 306 aaKnown RBP13.26□□□□□ -0.29
SGCA-201ENST00000262018 MLPHQ9BV36 600 aaPredicted RBP13.26□□□□□ -0.29
SGCA-201ENST00000262018 STRADBQ9C0K7 418 aa13.26□□□□□ -0.29
SGCA-201ENST00000262018 ILVBLA1L0T0 632 aa13.25□□□□□ -0.29
SGCA-201ENST00000262018 SDR42E2A6NKP2 422 aa13.25□□□□□ -0.29
SGCA-201ENST00000262018 C1QTNF3-AMACRE9PGA6 284 aa13.25□□□□□ -0.29
SGCA-201ENST00000262018 AGRPO00253 132 aa13.25□□□□□ -0.29
SGCA-201ENST00000262018 NVLO15381 856 aaKnown RBP13.25□□□□□ -0.29
SGCA-201ENST00000262018 SHOX2O60902 331 aaPredicted RBP13.25□□□□□ -0.29
SGCA-201ENST00000262018 CPP00450 1065 aa13.25□□□□□ -0.29
SGCA-201ENST00000262018 CSF2P04141 144 aa13.25□□□□□ -0.29
SGCA-201ENST00000262018 NME1P15531 152 aaKnown RBP13.25□□□□□ -0.29
SGCA-201ENST00000262018 ETFBP38117 255 aa13.25□□□□□ -0.29
SGCA-201ENST00000262018 PLK1P53350 603 aa13.25□□□□□ -0.29
SGCA-201ENST00000262018 POLE2P56282 527 aa13.25□□□□□ -0.29
SGCA-201ENST00000262018 RIPPLY3P57055 190 aa13.25□□□□□ -0.29
SGCA-201ENST00000262018 PPP2R2AP63151 447 aa13.25□□□□□ -0.29
SGCA-201ENST00000262018 IL10RBQ08334 325 aa13.25□□□□□ -0.29
SGCA-201ENST00000262018 FZD2Q14332 565 aa13.25□□□□□ -0.29
SGCA-201ENST00000262018 KLHL38Q2WGJ6 581 aa13.25□□□□□ -0.29
SGCA-201ENST00000262018 ABI3BPQ7Z7G0 1075 aa13.25□□□□□ -0.29
SGCA-201ENST00000262018 HORMAD1Q86X24 394 aa13.25□□□□□ -0.29
SGCA-201ENST00000262018 DCP2Q8IU60 420 aaKnown RBP13.25□□□□□ -0.29
SGCA-201ENST00000262018 TEX26Q8N6G2 289 aa13.25□□□□□ -0.29
SGCA-201ENST00000262018 FBF1Q8TES7 1133 aa13.25□□□□□ -0.29
SGCA-201ENST00000262018 ARHGEF2Q92974 986 aaKnown RBP13.25□□□□□ -0.29
SGCA-201ENST00000262018 FEM1AQ9BSK4 669 aa13.25□□□□□ -0.29
SGCA-201ENST00000262018 MUC3BQ9H195 1237 aa13.25□□□□□ -0.29
SGCA-201ENST00000262018 LRRC40Q9H9A6 602 aa13.25□□□□□ -0.29
SGCA-201ENST00000262018 PLAC1Q9HBJ0 212 aa13.25□□□□□ -0.29
SGCA-201ENST00000262018 CASS4Q9NQ75 786 aa13.25□□□□□ -0.29
SGCA-201ENST00000262018 RBM22Q9NW64 420 aaKnown RBP eCLIP13.25□□□□□ -0.29
SGCA-201ENST00000262018 ZC3H7BQ9UGR2 993 aaKnown RBP13.25□□□□□ -0.29
SGCA-201ENST00000262018 C2CD3Q4AC94 2353 aa13.24□□□□□ -0.29
SGCA-201ENST00000262018 J3KR12 359 aa13.24□□□□□ -0.29
SGCA-201ENST00000262018 ANXA9O76027 345 aa13.24□□□□□ -0.29
SGCA-201ENST00000262018 HLA-DQB2P05538 268 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms