RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 SVOPQ8N4V2 548 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.42□□□□□ -0.58
TROAP-201ENST00000257909 AADATQ8N5Z0 425 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 PSMA8Q8TAA3 256 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 CHAC2Q8WUX2 184 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 UGT2B28Q9BY64 529 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 AMBRA1Q9C0C7 1298 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 WDR6Q9NNW5 1121 aaKnown RBP11.42□□□□□ -0.58
TROAP-201ENST00000257909 DNAJB9Q9UBS3 223 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 C3orf18Q9UK00 162 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 PMF1-BGLAPU3KQ54 211 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 MYLKQ15746 1914 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 GRXCR2A6NFK2 248 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 KPNA6O60684 536 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 LRIG2O94898 1065 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 C1RP00736 705 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 ANXA6P08133 673 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 LINC00032P0C843 101 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 AGXTP21549 392 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 LMO2P25791 158 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 ACVR2AP27037 513 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 RYKP34925 604 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 ADRA1AP35348 466 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 KCNC1P48547 511 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 OR4D2P58180 307 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 PPP2R2BQ00005 443 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 KCNAB2Q13303 367 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 ZNF789Q5FWF6 425 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 GPR158Q5T848 1215 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 SULT1C3Q6IMI6 304 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 VASH1Q7L8A9 365 aaPredicted RBP11.42□□□□□ -0.58
TROAP-201ENST00000257909 LYSMD2Q8IV50 215 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 KCTD13Q8WZ19 329 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 YIPF6Q96EC8 236 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 TNIP3Q96KP6 325 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 WDR90Q96KV7 1748 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 ZNF300Q96RE9 604 aaPredicted RBP11.42□□□□□ -0.58
TROAP-201ENST00000257909 FSD1LQ9BXM9 530 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 DUSP16Q9BY84 665 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 TP63Q9H3D4 680 aaPredicted RBP11.42□□□□□ -0.58
TROAP-201ENST00000257909 DSN1Q9H410 356 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 TUBB1Q9H4B7 451 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 NOL6Q9H6R4 1146 aaKnown RBP11.42□□□□□ -0.58
TROAP-201ENST00000257909 GLOD4Q9HC38 313 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 AIG1Q9NVV5 245 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 TMEM45AQ9NWC5 275 aa11.42□□□□□ -0.58
TROAP-201ENST00000257909 MAGED1Q9Y5V3 778 aaPredicted RBP11.42□□□□□ -0.58
TROAP-201ENST00000257909 SBF1O95248 1867 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 LOC100130705A0A1B0GUX0 176 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 SLC22A3O75751 556 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 WISP3O95389 354 aaPredicted RBP11.41□□□□□ -0.58
TROAP-201ENST00000257909 C22orf31O95567 290 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 CCNCP24863 283 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 PIGAP37287 484 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 GRIK1P39086 918 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 CASP2P42575 452 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 POLR2JP52435 117 aaKnown RBP11.41□□□□□ -0.58
TROAP-201ENST00000257909 DIO3P55073 304 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 FOXA1P55317 472 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 VBP1P61758 197 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 CELF3Q5SZQ8 465 aaKnown RBP11.41□□□□□ -0.58
TROAP-201ENST00000257909 ZNF691Q5VV52 312 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 LAIR2Q6ISS4 152 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 PTGR2Q8N8N7 351 aaPredicted RBP11.41□□□□□ -0.58
TROAP-201ENST00000257909 SMURF2Q9HAU4 748 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 NEK6Q9HC98 313 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 PAK1IP1Q9NWT1 392 aaPredicted RBP11.41□□□□□ -0.58
TROAP-201ENST00000257909 INTS6Q9UL03 887 aaKnown RBP11.41□□□□□ -0.58
TROAP-201ENST00000257909 FAM92AA1XBS5 289 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 FAM172BPA6NC97 362 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 TAF4O00268 1085 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 PEX10O60683 326 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 PRR35P0CG20 571 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 PCNAP12004 261 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 BMPR1AP36894 532 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 ZFP36L2P47974 494 aaKnown RBP11.41□□□□□ -0.58
TROAP-201ENST00000257909 SLC13A2Q13183 592 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 SELPLGQ14242 412 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 TMEM236Q5W0B7 351 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 PAGE2Q7Z2X7 111 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 RBM23Q86U06 439 aaKnown RBP11.41□□□□□ -0.58
TROAP-201ENST00000257909 DCP2Q8IU60 420 aaKnown RBP11.41□□□□□ -0.58
TROAP-201ENST00000257909 ELMOD1Q8N336 334 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 FLAD1Q8NFF5 587 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 HTRA1Q92743 480 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 ISG20Q96AZ6 181 aaKnown RBP11.41□□□□□ -0.58
TROAP-201ENST00000257909 BRINP2Q9C0B6 783 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 SLIRPQ9GZT3 109 aaKnown RBP11.41□□□□□ -0.58
TROAP-201ENST00000257909 INTS7Q9NVH2 962 aaKnown RBP11.41□□□□□ -0.58
TROAP-201ENST00000257909 USP22Q9UPT9 525 aa11.41□□□□□ -0.58
TROAP-201ENST00000257909 MN1Q10571 1320 aaPredicted RBP11.4□□□□□ -0.58
TROAP-201ENST00000257909 ANKRD12Q6UB98 2062 aa11.4□□□□□ -0.58
TROAP-201ENST00000257909 FAM234BA2RU67 622 aa11.4□□□□□ -0.58
TROAP-201ENST00000257909 I6L893 689 aaPredicted RBP11.4□□□□□ -0.58
TROAP-201ENST00000257909 TSPAN1O60635 241 aa11.4□□□□□ -0.58
TROAP-201ENST00000257909 PTTG1O95997 202 aa11.4□□□□□ -0.58
TROAP-201ENST00000257909 APBA3O96018 575 aa11.4□□□□□ -0.58
TROAP-201ENST00000257909 CST1P01037 141 aa11.4□□□□□ -0.58
TROAP-201ENST00000257909 NPR3P17342 541 aa11.4□□□□□ -0.58
TROAP-201ENST00000257909 NR4A2P43354 598 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms