RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 MTIF3Q9H2K0 278 aaKnown RBP18.55■□□□□ 0.56
PDLIM4-201ENST00000253754 ZDHHC7Q9NXF8 308 aa18.55■□□□□ 0.56
PDLIM4-201ENST00000253754 PLK2Q9NYY3 685 aa18.55■□□□□ 0.56
PDLIM4-201ENST00000253754 STOML2Q9UJZ1 356 aa18.55■□□□□ 0.56
PDLIM4-201ENST00000253754 MAFFQ9ULX9 164 aa18.55■□□□□ 0.56
PDLIM4-201ENST00000253754 ANKRD36A6QL64 1941 aa18.55■□□□□ 0.56
PDLIM4-201ENST00000253754 PRUNE2Q8WUY3 3088 aa18.55■□□□□ 0.56
PDLIM4-201ENST00000253754 DOCK6Q96HP0 2047 aa18.55■□□□□ 0.56
PDLIM4-201ENST00000253754 LINC01553A4QN01 128 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 MAGEA13PA6NCF6 341 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 PRORSD1PA6NEY8 169 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 TRIM38O00635 465 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 SMAD6O43541 496 aaKnown RBP18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 VPS26AO75436 327 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 LYNP07948 512 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 FGF4P08620 206 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 CHRM3P20309 590 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 CES1P23141 567 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 CA5AP35218 305 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 TTPAP49638 278 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 HK3P52790 923 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 LCP2Q13094 533 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 CDH18Q13634 790 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 PITRM1Q5JRX3 1037 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 LILRA6Q6PI73 481 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 LYSMD3Q7Z3D4 306 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 ITIH5Q86UX2 942 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 RETREG3Q86VR2 466 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 CAMK1DQ8IU85 385 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 DCBLD1Q8N8Z6 715 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 POF1BQ8WVV4 589 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 LRCH3Q96II8 777 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 POLG2Q9UHN1 485 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 TRMT6Q9UJA5 497 aaKnown RBP18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 NRP2O60462 931 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 ATP6V0D1P61421 351 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 XIAPP98170 497 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 CYP4F8P98187 520 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 ILF2Q12905 390 aaKnown RBP18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 GSTA3Q16772 222 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 HTATIP2Q9BUP3 242 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 SLC25A23Q9BV35 468 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 VCX3BQ9H321 246 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 C6orf203Q9P0P8 240 aaPredicted RBP18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 CLEC4EQ9ULY5 219 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 ZNF711Q9Y462 761 aa18.54■□□□□ 0.56
PDLIM4-201ENST00000253754 GRXCR1A8MXD5 290 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 NR5A2O00482 541 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 NRG2O14511 850 aaPredicted RBP18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 FZD6O60353 706 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 DNAJA2O60884 412 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 ARHGEF15O94989 841 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 LRG1P02750 347 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 PYGLP06737 847 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 C8AP07357 584 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 RPS17P08708 135 aaKnown RBP18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 PPP3CCP48454 512 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 STX1BP61266 288 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 SCIMPQ6UWF3 145 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 MRPL43Q8N983 215 aaKnown RBP18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 KREMEN2Q8NCW0 462 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 SPPL3Q8TCT6 385 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 TUBGCP3Q96CW5 907 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 ALG14Q96F25 216 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 GCNAQ96QF7 691 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 NR1H4Q96RI1 486 aaPredicted RBP18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 PKP2Q99959 881 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 EMILIN2Q9BXX0 1053 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 IL1RL2Q9HB29 575 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 IL21Q9HBE4 155 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 RIMS3Q9UJD0 308 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 ZNF225Q9UK10 706 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 DTNAQ9Y4J8 743 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 TRIM24O15164 1050 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 RNF220Q5VTB9 566 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 ANKS6Q68DC2 871 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 FBXL19Q6PCT2 694 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 SYVN1Q86TM6 617 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 NKAPQ8N5F7 415 aaKnown RBP18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 HJURPQ8NCD3 748 aaPredicted RBP18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 ASB9Q96DX5 294 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 ASB2Q96Q27 587 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 GPR63Q9BZJ6 419 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 VCXQ9H320 206 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 IL17CQ9P0M4 197 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 SARDHQ9UL12 918 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 SUFUQ9UMX1 484 aa18.53■□□□□ 0.56
PDLIM4-201ENST00000253754 TRANK1O15050 2925 aa18.52■□□□□ 0.56
PDLIM4-201ENST00000253754 SPTBN5Q9NRC6 3674 aaKnown RBP18.52■□□□□ 0.56
PDLIM4-201ENST00000253754 A0A0J9YYE9 177 aa18.52■□□□□ 0.56
PDLIM4-201ENST00000253754 E5RI56 91 aa18.52■□□□□ 0.56
PDLIM4-201ENST00000253754 HGFP14210 728 aa18.52■□□□□ 0.56
PDLIM4-201ENST00000253754 UQCRBP14927 111 aa18.52■□□□□ 0.56
PDLIM4-201ENST00000253754 ADGRE1Q14246 886 aa18.52■□□□□ 0.56
PDLIM4-201ENST00000253754 VPS26BQ4G0F5 336 aa18.52■□□□□ 0.56
PDLIM4-201ENST00000253754 INO80DQ53TQ3 878 aaPredicted RBP18.52■□□□□ 0.56
PDLIM4-201ENST00000253754 C9orf50Q5SZB4 431 aa18.52■□□□□ 0.56
PDLIM4-201ENST00000253754 FAM109BQ6ICB4 259 aaPredicted RBP18.52■□□□□ 0.56
PDLIM4-201ENST00000253754 FAM151BQ6UXP7 276 aa18.52■□□□□ 0.56
PDLIM4-201ENST00000253754 Q6ZNB5 142 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms