RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 UGT1A8Q9HAW9 530 aa22.68■■□□□ 1.22
LSM4-201ENST00000252816 SATB2Q9UPW6 733 aa22.68■■□□□ 1.22
LSM4-201ENST00000252816 ZFC3H1O60293 1989 aaKnown RBP22.68■■□□□ 1.22
LSM4-201ENST00000252816 GLYATL1P3A0A0U1RQE8 302 aa22.67■■□□□ 1.22
LSM4-201ENST00000252816 GPR89AB7ZAQ6 455 aa22.67■■□□□ 1.22
LSM4-201ENST00000252816 STX7O15400 261 aaKnown RBP22.67■■□□□ 1.22
LSM4-201ENST00000252816 LIASO43766 372 aa22.67■■□□□ 1.22
LSM4-201ENST00000252816 GPR89BP0CG08 455 aa22.67■■□□□ 1.22
LSM4-201ENST00000252816 TAF1AQ15573 450 aaPredicted RBP22.67■■□□□ 1.22
LSM4-201ENST00000252816 C3orf38Q5JPI3 329 aa22.67■■□□□ 1.22
LSM4-201ENST00000252816 TMPRSS9Q7Z410 1059 aa22.67■■□□□ 1.22
LSM4-201ENST00000252816 ZNF547Q8IVP9 402 aa22.67■■□□□ 1.22
LSM4-201ENST00000252816 SLC37A2Q8TED4 501 aa22.67■■□□□ 1.22
LSM4-201ENST00000252816 C1orf54Q8WWF1 131 aa22.67■■□□□ 1.22
LSM4-201ENST00000252816 RTP4Q96DX8 246 aa22.67■■□□□ 1.22
LSM4-201ENST00000252816 ARNT2Q9HBZ2 717 aa22.67■■□□□ 1.22
LSM4-201ENST00000252816 SLC23A2Q9UGH3 650 aa22.67■■□□□ 1.22
LSM4-201ENST00000252816 KIF26BQ2KJY2 2108 aa22.67■■□□□ 1.22
LSM4-201ENST00000252816 CHD6Q8TD26 2715 aa22.66■■□□□ 1.22
LSM4-201ENST00000252816 A6NCN8 305 aa22.66■■□□□ 1.22
LSM4-201ENST00000252816 VEGFDO43915 354 aa22.66■■□□□ 1.22
LSM4-201ENST00000252816 PPFIA2O75334 1257 aa22.66■■□□□ 1.22
LSM4-201ENST00000252816 LPOP22079 712 aaPredicted RBP22.66■■□□□ 1.22
LSM4-201ENST00000252816 ALDH4A1P30038 563 aa22.66■■□□□ 1.22
LSM4-201ENST00000252816 SFRP1Q8N474 314 aa22.66■■□□□ 1.22
LSM4-201ENST00000252816 TAB3Q8N5C8 712 aaPredicted RBP22.66■■□□□ 1.22
LSM4-201ENST00000252816 OR4K2Q8NGD2 314 aa22.66■■□□□ 1.22
LSM4-201ENST00000252816 BRSK1Q8TDC3 778 aa22.66■■□□□ 1.22
LSM4-201ENST00000252816 PRR11Q96HE9 360 aaPredicted RBP22.66■■□□□ 1.22
LSM4-201ENST00000252816 TLR10Q9BXR5 811 aa22.66■■□□□ 1.22
LSM4-201ENST00000252816 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.66■■□□□ 1.22
LSM4-201ENST00000252816 C2orf81A6NN90 581 aa22.65■■□□□ 1.22
LSM4-201ENST00000252816 SNX2O60749 519 aa22.65■■□□□ 1.22
LSM4-201ENST00000252816 DXOO77932 396 aaKnown RBP22.65■■□□□ 1.22
LSM4-201ENST00000252816 CDK14O94921 469 aa22.65■■□□□ 1.22
LSM4-201ENST00000252816 FASLGP48023 281 aa22.65■■□□□ 1.22
LSM4-201ENST00000252816 TMEM115Q12893 351 aaPredicted RBP22.65■■□□□ 1.22
LSM4-201ENST00000252816 BIRC2Q13490 618 aa22.65■■□□□ 1.22
LSM4-201ENST00000252816 SIX1Q15475 284 aaPredicted RBP22.65■■□□□ 1.22
LSM4-201ENST00000252816 TBC1D25Q3MII6 688 aa22.65■■□□□ 1.22
LSM4-201ENST00000252816 PLA2G4EQ3MJ16 856 aa22.65■■□□□ 1.22
LSM4-201ENST00000252816 AMZ1Q400G9 498 aa22.65■■□□□ 1.22
LSM4-201ENST00000252816 IYDQ6PHW0 289 aa22.65■■□□□ 1.22
LSM4-201ENST00000252816 LRRTM4Q86VH4 590 aa22.65■■□□□ 1.22
LSM4-201ENST00000252816 GDAP1Q8TB36 358 aa22.65■■□□□ 1.22
LSM4-201ENST00000252816 FRMD8P1Q9BZ68 369 aaPredicted RBP22.65■■□□□ 1.22
LSM4-201ENST00000252816 PRDM8Q9NQV8 689 aa22.65■■□□□ 1.22
LSM4-201ENST00000252816 KLC4Q9NSK0 619 aa22.65■■□□□ 1.22
LSM4-201ENST00000252816 ITPR1Q14643 2758 aa22.64■■□□□ 1.22
LSM4-201ENST00000252816 GOLGA6L3A6NEY3 463 aa22.64■■□□□ 1.21
LSM4-201ENST00000252816 KMOO15229 486 aa22.64■■□□□ 1.21
LSM4-201ENST00000252816 NRDCO43847 1150 aa22.64■■□□□ 1.21
LSM4-201ENST00000252816 CCKBRP32239 447 aa22.64■■□□□ 1.21
LSM4-201ENST00000252816 GPR3P46089 330 aa22.64■■□□□ 1.21
LSM4-201ENST00000252816 CLCNKAP51800 687 aa22.64■■□□□ 1.21
LSM4-201ENST00000252816 INHBCP55103 352 aa22.64■■□□□ 1.21
LSM4-201ENST00000252816 ZFP36L1Q07352 338 aaKnown RBP22.64■■□□□ 1.21
LSM4-201ENST00000252816 SNX1Q13596 522 aa22.64■■□□□ 1.21
LSM4-201ENST00000252816 P3H1Q32P28 736 aa22.64■■□□□ 1.21
LSM4-201ENST00000252816 ZNF761Q86XN6 746 aaPredicted RBP22.64■■□□□ 1.21
LSM4-201ENST00000252816 TRIM58Q8NG06 486 aa22.64■■□□□ 1.21
LSM4-201ENST00000252816 OR13C4Q8NGS5 318 aa22.64■■□□□ 1.21
LSM4-201ENST00000252816 SNIP1Q8TAD8 396 aaKnown RBP22.64■■□□□ 1.21
LSM4-201ENST00000252816 FGF11Q92914 225 aa22.64■■□□□ 1.21
LSM4-201ENST00000252816 LIN37Q96GY3 246 aaPredicted RBP22.64■■□□□ 1.21
LSM4-201ENST00000252816 DCBLD2Q96PD2 775 aa22.64■■□□□ 1.21
LSM4-201ENST00000252816 RDH14Q9HBH5 336 aa22.64■■□□□ 1.21
LSM4-201ENST00000252816 EPB41L5Q9HCM4 733 aa22.64■■□□□ 1.21
LSM4-201ENST00000252816 ASCL3Q9NQ33 180 aa22.64■■□□□ 1.21
LSM4-201ENST00000252816 FEZ2Q9UHY8 353 aaPredicted RBP22.64■■□□□ 1.21
LSM4-201ENST00000252816 FKBPLQ9UIM3 349 aa22.64■■□□□ 1.21
LSM4-201ENST00000252816 A0A087WV48 116 aa22.63■■□□□ 1.21
LSM4-201ENST00000252816 CCDC187A0A096LP49 1063 aa22.63■■□□□ 1.21
LSM4-201ENST00000252816 PRR19A6NJB7 356 aa22.63■■□□□ 1.21
LSM4-201ENST00000252816 PRAMEF1O95521 474 aa22.63■■□□□ 1.21
LSM4-201ENST00000252816 AP2A1O95782 977 aa22.63■■□□□ 1.21
LSM4-201ENST00000252816 F3P13726 295 aa22.63■■□□□ 1.21
LSM4-201ENST00000252816 ZNF7P17097 686 aaPredicted RBP22.63■■□□□ 1.21
LSM4-201ENST00000252816 CD1CP29017 333 aa22.63■■□□□ 1.21
LSM4-201ENST00000252816 STIP1P31948 543 aaKnown RBP22.63■■□□□ 1.21
LSM4-201ENST00000252816 ACTN2P35609 894 aa22.63■■□□□ 1.21
LSM4-201ENST00000252816 ZNF140P52738 457 aaPredicted RBP22.63■■□□□ 1.21
LSM4-201ENST00000252816 ITGA9Q13797 1035 aa22.63■■□□□ 1.21
LSM4-201ENST00000252816 INSCQ1MX18 579 aa22.63■■□□□ 1.21
LSM4-201ENST00000252816 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.63■■□□□ 1.21
LSM4-201ENST00000252816 GPRC6AQ5T6X5 926 aa22.63■■□□□ 1.21
LSM4-201ENST00000252816 NKAIN2Q5VXU1 208 aa22.63■■□□□ 1.21
LSM4-201ENST00000252816 USP53Q70EK8 1073 aa22.63■■□□□ 1.21
LSM4-201ENST00000252816 C11orf96Q7Z7L8 435 aa22.63■■□□□ 1.21
LSM4-201ENST00000252816 PRUNE1Q86TP1 453 aa22.63■■□□□ 1.21
LSM4-201ENST00000252816 SLITRK4Q8IW52 837 aa22.63■■□□□ 1.21
LSM4-201ENST00000252816 LSMEM2Q8N112 164 aa22.63■■□□□ 1.21
LSM4-201ENST00000252816 DDHD1Q8NEL9 900 aa22.63■■□□□ 1.21
LSM4-201ENST00000252816 WDR36Q8NI36 951 aaKnown RBP22.63■■□□□ 1.21
LSM4-201ENST00000252816 ZNF398Q8TD17 642 aa22.63■■□□□ 1.21
LSM4-201ENST00000252816 TMEM74Q96NL1 305 aa22.63■■□□□ 1.21
LSM4-201ENST00000252816 NUDT22Q9BRQ3 303 aa22.63■■□□□ 1.21
LSM4-201ENST00000252816 TIMM29Q9BSF4 260 aa22.63■■□□□ 1.21
LSM4-201ENST00000252816 OSGEPL1Q9H4B0 414 aa22.63■■□□□ 1.21
LSM4-201ENST00000252816 LRRC40Q9H9A6 602 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms