RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 GLRBP48167 497 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 PRIM2P49643 509 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 MYBPC1Q00872 1141 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 BFSP2Q13515 415 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 DAG1Q14118 895 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 ZNF235Q14590 738 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 ACOX1Q15067 660 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 NEDD8Q15843 81 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 LAYNQ6UX15 382 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 KCTD8Q6ZWB6 473 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 RNF135Q8IUD6 432 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 SLC41A1Q8IVJ1 513 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 PLPP6Q8IY26 295 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 TMEM102Q8N9M5 508 aaPredicted RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 SMARCD1Q96GM5 515 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 OR52B2Q96RD2 323 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 TDRD1Q9BXT4 1180 aaKnown RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 SEMA6AQ9H2E6 1030 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 TFB2MQ9H5Q4 396 aaKnown RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 TRMT6Q9UJA5 497 aaKnown RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 RPS6KA6Q9UK32 745 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 CDH9Q9ULB4 789 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 H3BMM5 538 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 RHOBTB1O94844 696 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 KCNH1O95259 989 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 JUNBP17275 347 aaPredicted RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 HLA-DPA1P20036 260 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 CD9P21926 228 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 DCKP27707 260 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 CCR1P32246 355 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 ETFBP38117 255 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 SLC5A3P53794 718 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 MRPS15P82914 257 aaKnown RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 RUNX1T1Q06455 604 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 TRAF3Q13114 568 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 CYP2R1Q6VVX0 501 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 GK5Q6ZS86 529 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 FAM35AQ86V20 835 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 FIBCD1Q8N539 461 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 ARRDC2Q8TBH0 407 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 GRIN3AQ8TCU5 1115 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 ADAMTS16Q8TE57 1224 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 GLMNQ92990 594 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 ULK4Q96C45 1275 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 PCED1BQ96HM7 432 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 ZNF668Q96K58 619 aaPredicted RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 MARK4Q96L34 752 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 PPP1R36Q96LQ0 422 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 AGAP2Q99490 1192 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 SMOC2Q9H3U7 446 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 RETREG1Q9H6L5 497 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 AGO3Q9H9G7 860 aaKnown RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 MID1IP1Q9NPA3 183 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 DNMT3BQ9UBC3 853 aaKnown RBP4.12□□□□□ -1.75
UBE4A-201ENST00000252108 DKK3Q9UBP4 350 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 DNAJB9Q9UBS3 223 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 VWA7Q9Y334 891 aa4.12□□□□□ -1.75
UBE4A-201ENST00000252108 LOC285095A0A1B0GVY8 99 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 FAM234BA2RU67 622 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 PRR23AA6NEV1 266 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 TCAF2A6NFQ2 919 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 SLC28A1O00337 649 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 TIPRLO75663 272 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 ODC1P11926 461 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 PTPN1P18031 435 aaKnown RBP4.11□□□□□ -1.75
UBE4A-201ENST00000252108 HTR1EP28566 365 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 YBX1P67809 324 aaKnown RBP4.11□□□□□ -1.75
UBE4A-201ENST00000252108 ADIGQ0VDE8 80 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 CEACAM7Q14002 265 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 TCTN1Q2MV58 587 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 SMU1Q2TAY7 513 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 ERICH5Q6P6B1 374 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 STK32CQ86UX6 486 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 RASAL3Q86YV0 1011 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 MICU2Q8IYU8 434 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 ARL10Q8N8L6 244 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 C2CD4AQ8NCU7 369 aaPredicted RBP4.11□□□□□ -1.75
UBE4A-201ENST00000252108 CHPT1Q8WUD6 406 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 MYDGFQ969H8 173 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 FCRL2Q96LA5 508 aaPredicted RBP4.11□□□□□ -1.75
UBE4A-201ENST00000252108 C1orf74Q96LT6 269 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 GPN2Q9H9Y4 310 aaPredicted RBP4.11□□□□□ -1.75
UBE4A-201ENST00000252108 NECTIN3Q9NQS3 549 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 RGS18Q9NS28 235 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 OLA1Q9NTK5 396 aaKnown RBP4.11□□□□□ -1.75
UBE4A-201ENST00000252108 CORO2BQ9UQ03 480 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 AP1M2Q9Y6Q5 423 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 DRGXA6NNA5 263 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 E5RI56 91 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 LOC110117498-PIK3R3F6TDL0 507 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 PLK4O00444 970 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 SDHDO14521 159 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 PRMT5O14744 637 aaPredicted RBP4.11□□□□□ -1.75
UBE4A-201ENST00000252108 STX7O15400 261 aaKnown RBP4.11□□□□□ -1.75
UBE4A-201ENST00000252108 RGS14O43566 566 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 SLC22A3O75751 556 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 CD160O95971 181 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 FGF1P05230 155 aa4.11□□□□□ -1.75
UBE4A-201ENST00000252108 PPIBP23284 216 aaKnown RBP4.11□□□□□ -1.75
UBE4A-201ENST00000252108 ALDH3A2P51648 485 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms