RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 A0A087WXM4 84 aa12.51□□□□□ -0.41
RAB3IP-201ENST00000247833 KANSL1LA0AUZ9 987 aa12.51□□□□□ -0.41
RAB3IP-201ENST00000247833 SNAP91O60641 907 aa12.51□□□□□ -0.41
RAB3IP-201ENST00000247833 PRAMEF11O60813 436 aa12.51□□□□□ -0.41
RAB3IP-201ENST00000247833 CAPN1P07384 714 aa12.51□□□□□ -0.41
RAB3IP-201ENST00000247833 INHBCP55103 352 aa12.51□□□□□ -0.41
RAB3IP-201ENST00000247833 RHOAP61586 193 aa12.51□□□□□ -0.41
RAB3IP-201ENST00000247833 YBX1P67809 324 aaKnown RBP12.51□□□□□ -0.41
RAB3IP-201ENST00000247833 PAGE3Q5JUK9 113 aa12.51□□□□□ -0.41
RAB3IP-201ENST00000247833 CLLU1OSQ5K130 101 aa12.51□□□□□ -0.41
RAB3IP-201ENST00000247833 FAM117BQ6P1L5 589 aa12.51□□□□□ -0.41
RAB3IP-201ENST00000247833 FAM151BQ6UXP7 276 aa12.51□□□□□ -0.41
RAB3IP-201ENST00000247833 RNF19BQ6ZMZ0 732 aa12.51□□□□□ -0.41
RAB3IP-201ENST00000247833 SYVN1Q86TM6 617 aa12.51□□□□□ -0.41
RAB3IP-201ENST00000247833 ZNF598Q86UK7 904 aaKnown RBP12.51□□□□□ -0.41
RAB3IP-201ENST00000247833 PIANPQ8IYJ0 282 aa12.51□□□□□ -0.41
RAB3IP-201ENST00000247833 NAT16Q8N8M0 369 aa12.51□□□□□ -0.41
RAB3IP-201ENST00000247833 SLC39A13Q96H72 371 aa12.51□□□□□ -0.41
RAB3IP-201ENST00000247833 TUBB1Q9H4B7 451 aa12.51□□□□□ -0.41
RAB3IP-201ENST00000247833 TFB2MQ9H5Q4 396 aaKnown RBP12.51□□□□□ -0.41
RAB3IP-201ENST00000247833 PRDM5Q9NQX1 630 aaPredicted RBP12.51□□□□□ -0.41
RAB3IP-201ENST00000247833 LEF1Q9UJU2 399 aaPredicted RBP12.51□□□□□ -0.41
RAB3IP-201ENST00000247833 MROH6A6NGR9 719 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 SEPT4O43236 478 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 KERAO60938 352 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 ACADVLP49748 655 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 CREB5Q02930 508 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 BNIP2Q12982 314 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 PRKG2Q13237 762 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 AASDHQ4L235 1098 aaPredicted RBP12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 TMEM126BQ8IUX1 230 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 CCDC117Q8IWD4 279 aaPredicted RBP12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 CHERPQ8IWX8 916 aaKnown RBP12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 CMTR2Q8IYT2 770 aaKnown RBP12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 NKAPQ8N5F7 415 aaKnown RBP12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 L3HYPDHQ96EM0 354 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 TEX37Q96LM6 180 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 SLC30A3Q99726 388 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 PREBQ9HCU5 417 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 GALNT8Q9NY28 637 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 WWOXQ9NZC7 414 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 ZNHIT2Q9UHR6 403 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 PCDHB7Q9Y5E2 793 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 INSIG1O15503 277 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 GJB5O95377 273 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 SLC5A2P31639 672 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 RPL38P63173 70 aaKnown RBP12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 MERTKQ12866 999 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 ATXN7L2Q5T6C5 722 aaPredicted RBP12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 KIAA1191Q96A73 305 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 SBF1O95248 1867 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 TCRBV3S1A0A5B6 114 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 MTHFD2P13995 350 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 HSPA7P48741 367 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 ATP6V0D1P61421 351 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 FIBCD1Q8N539 461 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 CENPNQ96H22 339 aaPredicted RBP12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 FUBP3Q96I24 572 aaKnown RBP eCLIP12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 ZNF597Q96LX8 424 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 ATOH8Q96SQ7 321 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 PKMYT1Q99640 499 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 ADGRE3Q9BY15 652 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 CLPBQ9H078 707 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 PLK2Q9NYY3 685 aa12.5□□□□□ -0.41
RAB3IP-201ENST00000247833 ACSL4O60488 711 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 HOXB8P17481 243 aaPredicted RBP12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 GDF5P43026 501 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 ADARP55265 1226 aaKnown RBP12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 DCTN2Q13561 401 aaKnown RBP12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 GLYATQ6IB77 296 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 RNF180Q86T96 592 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 CLDN19Q8N6F1 224 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 TOP1MTQ969P6 601 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 C8orf48Q96LL4 319 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 KLQ9UEF7 1012 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 LIMD1Q9UGP4 676 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 EVLQ9UI08 416 aaPredicted RBP12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 DNMT3LQ9UJW3 386 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 LOC285095A0A1B0GVY8 99 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 H3BNH8 94 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 C1RP00736 705 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 ALPIP09923 528 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 CDH2P19022 906 aaPredicted RBP12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 OGNP20774 298 aaKnown RBP12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 MAP4P27816 1152 aaKnown RBP12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 CORO1AP31146 461 aaKnown RBP12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 OR1D2P34982 312 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 CHRNB3Q05901 458 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 C17orf99Q6UX52 265 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 CYHR1Q6ZMK1 362 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 BEND5Q7L4P6 421 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 IFNL1Q8IU54 200 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 TICAM1Q8IUC6 712 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 ITFG1Q8TB96 612 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 CRISPLD1Q9H336 500 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 CCM2LQ9NUG4 571 aaPredicted RBP12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 CD300AQ9UGN4 299 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 IKZF3Q9UKT9 509 aa12.49□□□□□ -0.41
RAB3IP-201ENST00000247833 SLC8A2Q9UPR5 921 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms