RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 SFT2D3Q587I9 215 aa12.61□□□□□ -0.39
SNAI1-201ENST00000244050 LPCAT4Q643R3 524 aa12.61□□□□□ -0.39
SNAI1-201ENST00000244050 HACD2Q6Y1H2 254 aa12.61□□□□□ -0.39
SNAI1-201ENST00000244050 BBS7Q8IWZ6 715 aa12.61□□□□□ -0.39
SNAI1-201ENST00000244050 FAM217AQ8IXS0 508 aa12.61□□□□□ -0.39
SNAI1-201ENST00000244050 DDI1Q8WTU0 396 aa12.61□□□□□ -0.39
SNAI1-201ENST00000244050 MRPL38Q96DV4 380 aaKnown RBP12.61□□□□□ -0.39
SNAI1-201ENST00000244050 C19orf60Q96EN9 201 aa12.61□□□□□ -0.39
SNAI1-201ENST00000244050 SLC25A23Q9BV35 468 aa12.61□□□□□ -0.39
SNAI1-201ENST00000244050 ADGRE3Q9BY15 652 aa12.61□□□□□ -0.39
SNAI1-201ENST00000244050 SMG9Q9H0W8 520 aaKnown RBP12.61□□□□□ -0.39
SNAI1-201ENST00000244050 CCDC68Q9H2F9 335 aa12.61□□□□□ -0.39
SNAI1-201ENST00000244050 DNMT3BQ9UBC3 853 aaKnown RBP12.61□□□□□ -0.39
SNAI1-201ENST00000244050 PACSIN3Q9UKS6 424 aa12.61□□□□□ -0.39
SNAI1-201ENST00000244050 RAI2Q9Y5P3 530 aa12.61□□□□□ -0.39
SNAI1-201ENST00000244050 OAS3Q9Y6K5 1087 aaKnown RBP12.61□□□□□ -0.39
SNAI1-201ENST00000244050 DOCK6Q96HP0 2047 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 EIF4E1BA6NMX2 242 aaKnown RBP12.6□□□□□ -0.39
SNAI1-201ENST00000244050 ANKRD66B4E2M5 251 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 UBXN8O00124 270 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 LEFTY2O00292 366 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 FBP2O00757 339 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 PER2O15055 1255 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 PFDN6O15212 129 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 XYLBO75191 536 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 SRP72O76094 671 aaKnown RBP12.6□□□□□ -0.39
SNAI1-201ENST00000244050 CD160O95971 181 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 PYGLP06737 847 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 RHOP08100 348 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 UQCRBP14927 111 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 DDX6P26196 483 aaKnown RBP eCLIP12.6□□□□□ -0.39
SNAI1-201ENST00000244050 PEX2P28328 305 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 HOXA9P31269 272 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 FMO4P31512 558 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 EPHA5P54756 1037 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 PKNOX1P55347 436 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 IRX1P78414 480 aaPredicted RBP12.6□□□□□ -0.39
SNAI1-201ENST00000244050 RAD51Q06609 339 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 GPM6BQ13491 265 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 TEAD2Q15562 447 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 TRIP10Q15642 601 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 AGKQ53H12 422 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 INO80DQ53TQ3 878 aaPredicted RBP12.6□□□□□ -0.39
SNAI1-201ENST00000244050 CLEC6AQ6EIG7 209 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 NCEH1Q6PIU2 408 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 PAQR3Q6TCH7 311 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 RYBPQ8N488 228 aaPredicted RBP12.6□□□□□ -0.39
SNAI1-201ENST00000244050 NKAPQ8N5F7 415 aaKnown RBP12.6□□□□□ -0.39
SNAI1-201ENST00000244050 TCEAL4Q96EI5 215 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 SAMD11Q96NU1 681 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 BTBD9Q96Q07 612 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 SPATS2LQ9NUQ6 558 aaKnown RBP12.6□□□□□ -0.39
SNAI1-201ENST00000244050 CACNA2D2Q9NY47 1150 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 DLGAP2Q9P1A6 1054 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 DNAJC15Q9Y5T4 150 aa12.6□□□□□ -0.39
SNAI1-201ENST00000244050 UBA6A0AVT1 1052 aaPredicted RBP12.59□□□□□ -0.39
SNAI1-201ENST00000244050 SYCE1LA8MT33 242 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 STX16-NPEPL1H3BU86 382 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 H7C0S8 307 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 GFRA2O00451 464 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 AZIN1O14977 448 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 KIF1CO43896 1103 aaKnown RBP12.59□□□□□ -0.39
SNAI1-201ENST00000244050 KLK8O60259 260 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 CAPNS1P04632 268 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 HNRNPA1P09651 372 aaKnown RBP eCLIP12.59□□□□□ -0.39
SNAI1-201ENST00000244050 PRSS56P0CW18 603 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 PIM1P11309 404 aaPredicted RBP12.59□□□□□ -0.39
SNAI1-201ENST00000244050 MZF1P28698 734 aaPredicted RBP12.59□□□□□ -0.39
SNAI1-201ENST00000244050 TTPAP49638 278 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 CDH13P55290 713 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 ARF5P84085 180 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 COL19A1Q14993 1142 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 PFKFB4Q16877 469 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 MPPE1Q53F39 396 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 KANK2Q63ZY3 851 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 REP15Q6BDI9 236 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 OR52E8Q6IFG1 317 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 PDE12Q6L8Q7 609 aaKnown RBP12.59□□□□□ -0.39
SNAI1-201ENST00000244050 C8orf82Q6P1X6 216 aaPredicted RBP12.59□□□□□ -0.39
SNAI1-201ENST00000244050 TPGS1Q6ZTW0 290 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 RBM23Q86U06 439 aaKnown RBP12.59□□□□□ -0.39
SNAI1-201ENST00000244050 CMTM8Q8IZV2 173 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 CPXM2Q8N436 756 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 TTC30BQ8N4P2 665 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 LPCAT1Q8NF37 534 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 USP13Q92995 863 aaPredicted RBP12.59□□□□□ -0.39
SNAI1-201ENST00000244050 ASB9Q96DX5 294 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 SPDL1Q96EA4 605 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 EXOC2Q96KP1 924 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 C3orf30Q96M34 536 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 BIRC8Q96P09 236 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 C1QTNF3Q9BXJ4 246 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 EBF3Q9H4W6 596 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 MID1IP1Q9NPA3 183 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 PDP2Q9P2J9 529 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 SUCOQ9UBS9 1254 aaKnown RBP12.59□□□□□ -0.39
SNAI1-201ENST00000244050 DPP7Q9UHL4 492 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 TMCO1Q9UM00 188 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 PCDHGC4Q9Y5F7 938 aa12.59□□□□□ -0.39
SNAI1-201ENST00000244050 COMMD10Q9Y6G5 202 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms