RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 MID1O15344 667 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 PGRP06401 933 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 CKBP12277 381 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 PIK3R6Q5UE93 754 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 SHC3Q92529 594 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 TADA1Q96BN2 335 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 TRIM43Q96BQ3 446 aaPredicted RBP7.48□□□□□ -1.21
RIF1-201ENST00000243326 PIWIL1Q96J94 861 aaKnown RBP7.48□□□□□ -1.21
RIF1-201ENST00000243326 WDR12Q9GZL7 423 aaKnown RBP7.48□□□□□ -1.21
RIF1-201ENST00000243326 MED28Q9H204 178 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 SGK2Q9HBY8 427 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 TRPM5Q9NZQ8 1165 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 AP3D1O14617 1153 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 DPYSQ14117 519 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 TSTQ16762 297 aaKnown RBP7.47□□□□□ -1.21
RIF1-201ENST00000243326 OR5AK3PQ8NH89 298 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 STAG3L4Q8TBR4 150 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 FBXO5Q9UKT4 447 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 FRMPD1Q5SYB0 1578 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 KNDC1Q76NI1 1749 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 AIREO43918 545 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 SNAP91O60641 907 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 DBIP07108 87 aaKnown RBP7.47□□□□□ -1.21
RIF1-201ENST00000243326 WARSP23381 471 aaKnown RBP7.47□□□□□ -1.21
RIF1-201ENST00000243326 SEMA3AQ14563 771 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 TAF13Q15543 124 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 SPERTQ8NA61 448 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 TBC1D30Q9Y2I9 924 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 BIRC5O15392 142 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 PTPRAP18433 802 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 ZMYND11Q15326 602 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 NXF3Q9H4D5 531 aaKnown RBP7.47□□□□□ -1.21
RIF1-201ENST00000243326 SLC2A6Q9UGQ3 507 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 RPS6KA6Q9UK32 745 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 A8MU76 341 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 FPGTO14772 594 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 KPNA6O60684 536 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 RSL1D1O76021 490 aaKnown RBP7.47□□□□□ -1.21
RIF1-201ENST00000243326 FUT2Q10981 343 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 TGFBIQ15582 683 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 DLK2Q6UY11 383 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 FAM129CQ86XR2 697 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 IL4I1Q96RQ9 567 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 NLNQ9BYT8 704 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 SIX2Q9NPC8 291 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 TIMMDC1Q9NPL8 285 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 PRELID1Q9Y255 219 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 INPPL1O15357 1258 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 SNAPC2Q13487 334 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 ZNF484Q5JVG2 852 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 ZZZ3Q8IYH5 903 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 RAPGEFL1Q9UHV5 662 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 STXBP5LQ9Y2K9 1186 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 ARHGEF17Q96PE2 2063 aaPredicted RBP7.47□□□□□ -1.21
RIF1-201ENST00000243326 RNASEH1O60930 286 aaKnown RBP7.47□□□□□ -1.21
RIF1-201ENST00000243326 C4BPBP20851 252 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 UBA1P22314 1058 aaKnown RBP7.47□□□□□ -1.21
RIF1-201ENST00000243326 CDK9P50750 372 aaKnown RBP7.47□□□□□ -1.21
RIF1-201ENST00000243326 WNT3AP56704 352 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 GPR21Q99679 349 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 ACO2Q99798 780 aaKnown RBP7.47□□□□□ -1.21
RIF1-201ENST00000243326 BRD9Q9H8M2 597 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 KIAA1257Q9ULG3 409 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 GSTK1Q9Y2Q3 226 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 CYP1A1P04798 512 aaPredicted RBP7.47□□□□□ -1.21
RIF1-201ENST00000243326 DRG2P55039 364 aaKnown RBP7.47□□□□□ -1.21
RIF1-201ENST00000243326 BTBD16Q32M84 506 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 IL22Q9GZX6 179 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 EBF1Q9UH73 591 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 SNTNA6NMZ2 147 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 CELF2O95319 508 aaKnown RBP7.47□□□□□ -1.21
RIF1-201ENST00000243326 ASLP04424 464 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 LMO2P25791 158 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 HSPB3Q12988 150 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 OR10G6Q8NH81 332 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 KCNA7Q96RP8 456 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 OXCT2Q9BYC2 517 aaPredicted RBP7.47□□□□□ -1.21
RIF1-201ENST00000243326 SUV39H1O43463 412 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 OR56A5P0C7T3 313 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 PNPLA4P41247 253 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 DSC2Q02487 901 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 SNAPC1Q16533 368 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 PIM3Q86V86 326 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 PARGQ86W56 976 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 PLD5Q8N7P1 536 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 TMIGD2Q96BF3 282 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 LRCH4O75427 683 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 F9P00740 461 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 ARF4P18085 180 aaPredicted RBP7.47□□□□□ -1.21
RIF1-201ENST00000243326 LCN1P1Q5VSP4 162 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 UBE2R2Q712K3 238 aaPredicted RBP7.47□□□□□ -1.21
RIF1-201ENST00000243326 LRRC15Q8TF66 581 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 MRPL15Q9P015 296 aaKnown RBP7.47□□□□□ -1.21
RIF1-201ENST00000243326 ADAMTS6Q9UKP5 1117 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 ARL5AQ9Y689 179 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 MPP2Q14168 576 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 NPTX1Q15818 432 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 ANKRD26P1Q6NSI1 321 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 CENPSQ8N2Z9 138 aa7.47□□□□□ -1.21
RIF1-201ENST00000243326 ADCY4Q8NFM4 1077 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms