RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 MID1IP1Q9NPA3 183 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 GLYATL1P3A0A0U1RQE8 302 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 PER2O15055 1255 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 CCNT2O60583 730 aaKnown RBP18.32■□□□□ 0.52
HOXC11-201ENST00000243082 POP4O95707 220 aaKnown RBP18.32■□□□□ 0.52
HOXC11-201ENST00000243082 ZNF7P17097 686 aaPredicted RBP18.32■□□□□ 0.52
HOXC11-201ENST00000243082 ITGALP20701 1170 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 CCNG1P51959 295 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 ACTR3P61158 418 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 CHRNA6Q15825 494 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 FBXO48Q5FWF7 155 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 TMEM215Q68D42 235 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 TPRG1Q6ZUI0 275 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 TRPC4APQ8TEL6 797 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 DNAJC15Q9Y5T4 150 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 WNT6Q9Y6F9 365 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 PRSS21Q9Y6M0 314 aa18.32■□□□□ 0.52
HOXC11-201ENST00000243082 STX16-NPEPL1H3BU86 382 aa18.31■□□□□ 0.52
HOXC11-201ENST00000243082 STX16O14662 325 aa18.31■□□□□ 0.52
HOXC11-201ENST00000243082 RPS17P08708 135 aaKnown RBP18.31■□□□□ 0.52
HOXC11-201ENST00000243082 ACRV1P26436 265 aa18.31■□□□□ 0.52
HOXC11-201ENST00000243082 SPAM1P38567 509 aa18.31■□□□□ 0.52
HOXC11-201ENST00000243082 CLCQ05315 142 aa18.31■□□□□ 0.52
HOXC11-201ENST00000243082 CBX2Q14781 532 aaPredicted RBP18.31■□□□□ 0.52
HOXC11-201ENST00000243082 RCN1Q15293 331 aa18.31■□□□□ 0.52
HOXC11-201ENST00000243082 GRAMD4Q6IC98 578 aa18.31■□□□□ 0.52
HOXC11-201ENST00000243082 ELMSAN1Q6PJG2 1045 aa18.31■□□□□ 0.52
HOXC11-201ENST00000243082 LARP4Q71RC2 724 aaKnown RBP eCLIP18.31■□□□□ 0.52
HOXC11-201ENST00000243082 KIAA0907Q7Z7F0 614 aaPredicted RBP18.31■□□□□ 0.52
HOXC11-201ENST00000243082 RBFAQ8N0V3 343 aa18.31■□□□□ 0.52
HOXC11-201ENST00000243082 GPR26Q8NDV2 337 aa18.31■□□□□ 0.52
HOXC11-201ENST00000243082 MYLIPQ8WY64 445 aa18.31■□□□□ 0.52
HOXC11-201ENST00000243082 ZNF707Q96C28 371 aaPredicted RBP18.31■□□□□ 0.52
HOXC11-201ENST00000243082 PDLIM5Q96HC4 596 aaKnown RBP18.31■□□□□ 0.52
HOXC11-201ENST00000243082 C3orf30Q96M34 536 aa18.31■□□□□ 0.52
HOXC11-201ENST00000243082 MCCC1Q96RQ3 725 aaPredicted RBP18.31■□□□□ 0.52
HOXC11-201ENST00000243082 C1QTNF3Q9BXJ4 246 aa18.31■□□□□ 0.52
HOXC11-201ENST00000243082 CLPBQ9H078 707 aa18.31■□□□□ 0.52
HOXC11-201ENST00000243082 ZDHHC6Q9H6R6 413 aa18.31■□□□□ 0.52
HOXC11-201ENST00000243082 CDH22Q9UJ99 828 aa18.31■□□□□ 0.52
HOXC11-201ENST00000243082 ZNF106Q9H2Y7 1883 aaKnown RBP18.31■□□□□ 0.52
HOXC11-201ENST00000243082 A0A1B0GTL3 188 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 NCF1BA6NI72 391 aaPredicted RBP18.3■□□□□ 0.52
HOXC11-201ENST00000243082 NCF1CA8MVU1 366 aaPredicted RBP18.3■□□□□ 0.52
HOXC11-201ENST00000243082 AIM2O14862 343 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 TRIM24O15164 1050 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 CHRM1P11229 460 aaPredicted RBP18.3■□□□□ 0.52
HOXC11-201ENST00000243082 NCF1P14598 390 aaPredicted RBP18.3■□□□□ 0.52
HOXC11-201ENST00000243082 TCF3P15923 654 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 CEBPBP17676 345 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 FOXA1P55317 472 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 DMC1Q14565 340 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 C6orf163Q5TEZ5 329 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 C1orf146Q5VVC0 180 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 ANKS6Q68DC2 871 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 PTRHD1Q6GMV3 140 aaKnown RBP18.3■□□□□ 0.52
HOXC11-201ENST00000243082 Q6ZVU0 165 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 CHST14Q8NCH0 376 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 CFAP61Q8NHU2 1237 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 HMGCLL1Q8TB92 370 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 KCNV2Q8TDN2 545 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 ING5Q8WYH8 240 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 CIPCQ9C0C6 399 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 C15orf41Q9Y2V0 281 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 AGAP14A8MT82 685 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 AZIN1O14977 448 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 UBDO15205 165 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 SORBS2O94875 1100 aaKnown RBP18.3■□□□□ 0.52
HOXC11-201ENST00000243082 UGT2B4P06133 528 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 AGTR2P50052 363 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 PTSQ03393 145 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 TBL3Q12788 808 aaKnown RBP18.3■□□□□ 0.52
HOXC11-201ENST00000243082 LCP2Q13094 533 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 LYPLAL1Q5VWZ2 237 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 KANK2Q63ZY3 851 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 LRRC66Q68CR7 880 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 GPSM1Q86YR5 675 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 CLDN19Q8N6F1 224 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 ZNF557Q8N988 423 aaPredicted RBP18.3■□□□□ 0.52
HOXC11-201ENST00000243082 LKAAEAR1Q8TD35 194 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 STMN2Q93045 179 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 C19orf60Q96EN9 201 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 ZNF641Q96N77 438 aaPredicted RBP18.3■□□□□ 0.52
HOXC11-201ENST00000243082 TTC1Q99614 292 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 LBHD1Q9BQE6 289 aaPredicted RBP18.3■□□□□ 0.52
HOXC11-201ENST00000243082 MARK1Q9P0L2 795 aa18.3■□□□□ 0.52
HOXC11-201ENST00000243082 PDE5AO76074 875 aa18.29■□□□□ 0.52
HOXC11-201ENST00000243082 RB1P06400 928 aa18.29■□□□□ 0.52
HOXC11-201ENST00000243082 HSPA1AP0DMV8 641 aaKnown RBP18.29■□□□□ 0.52
HOXC11-201ENST00000243082 HSPA1BP0DMV9 641 aaKnown RBP18.29■□□□□ 0.52
HOXC11-201ENST00000243082 LHCGRP22888 699 aa18.29■□□□□ 0.52
HOXC11-201ENST00000243082 NUDT2P50583 147 aa18.29■□□□□ 0.52
HOXC11-201ENST00000243082 PTPN5P54829 565 aa18.29■□□□□ 0.52
HOXC11-201ENST00000243082 GPR33Q49SQ1 333 aa18.29■□□□□ 0.52
HOXC11-201ENST00000243082 TXNDC11Q6PKC3 985 aa18.29■□□□□ 0.52
HOXC11-201ENST00000243082 USP45Q70EL2 814 aa18.29■□□□□ 0.52
HOXC11-201ENST00000243082 MYLK4Q86YV6 388 aaPredicted RBP18.29■□□□□ 0.52
HOXC11-201ENST00000243082 NAT16Q8N8M0 369 aa18.29■□□□□ 0.52
HOXC11-201ENST00000243082 KYQ8NBH2 561 aa18.29■□□□□ 0.52
HOXC11-201ENST00000243082 OR2A12Q8NGT7 310 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms