RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 A0A0U1RQJ8 604 aa13.66□□□□□ -0.22
DDX39A-201ENST00000242776 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.66□□□□□ -0.22
DDX39A-201ENST00000242776 PROSCO94903 275 aa13.66□□□□□ -0.22
DDX39A-201ENST00000242776 SOD1P00441 154 aa13.66□□□□□ -0.22
DDX39A-201ENST00000242776 ACP5P13686 325 aa13.66□□□□□ -0.22
DDX39A-201ENST00000242776 SLC1A1P43005 524 aa13.66□□□□□ -0.22
DDX39A-201ENST00000242776 FASLGP48023 281 aa13.66□□□□□ -0.22
DDX39A-201ENST00000242776 GFERP55789 205 aa13.66□□□□□ -0.22
DDX39A-201ENST00000242776 TMCO4Q5TGY1 634 aa13.66□□□□□ -0.22
DDX39A-201ENST00000242776 ZNF787Q6DD87 383 aa13.66□□□□□ -0.22
DDX39A-201ENST00000242776 C6orf15Q6UXA7 325 aaPredicted RBP13.66□□□□□ -0.22
DDX39A-201ENST00000242776 RFX8Q6ZV50 586 aa13.66□□□□□ -0.22
DDX39A-201ENST00000242776 DAAM2Q86T65 1068 aa13.66□□□□□ -0.22
DDX39A-201ENST00000242776 TRIM58Q8NG06 486 aa13.66□□□□□ -0.22
DDX39A-201ENST00000242776 CPT1CQ8TCG5 803 aa13.66□□□□□ -0.22
DDX39A-201ENST00000242776 SSC4DQ8WTU2 575 aa13.66□□□□□ -0.22
DDX39A-201ENST00000242776 BTBD6Q96KE9 485 aa13.66□□□□□ -0.22
DDX39A-201ENST00000242776 PSKH2Q96QS6 385 aa13.66□□□□□ -0.22
DDX39A-201ENST00000242776 PEBP4Q96S96 227 aa13.66□□□□□ -0.22
DDX39A-201ENST00000242776 TWSG1Q9GZX9 223 aa13.66□□□□□ -0.22
DDX39A-201ENST00000242776 STN1Q9H668 368 aaKnown RBP13.66□□□□□ -0.22
DDX39A-201ENST00000242776 MAP10Q9P2G4 905 aa13.66□□□□□ -0.22
DDX39A-201ENST00000242776 PDP2Q9P2J9 529 aa13.66□□□□□ -0.22
DDX39A-201ENST00000242776 RCOR3Q9P2K3 495 aaPredicted RBP13.66□□□□□ -0.22
DDX39A-201ENST00000242776 TBC1D29Q9UFV1 150 aa13.66□□□□□ -0.22
DDX39A-201ENST00000242776 PHTF1Q9UMS5 762 aa13.66□□□□□ -0.22
DDX39A-201ENST00000242776 POLHQ9Y253 713 aa13.66□□□□□ -0.22
DDX39A-201ENST00000242776 OAS3Q9Y6K5 1087 aaKnown RBP13.66□□□□□ -0.22
DDX39A-201ENST00000242776 UNC79Q9P2D8 2635 aa13.65□□□□□ -0.22
DDX39A-201ENST00000242776 PIPSLA2A3N6 862 aa13.65□□□□□ -0.22
DDX39A-201ENST00000242776 HTRA2O43464 458 aaPredicted RBP13.65□□□□□ -0.22
DDX39A-201ENST00000242776 KIF5CO60282 957 aa13.65□□□□□ -0.22
DDX39A-201ENST00000242776 RFPL1O75677 317 aa13.65□□□□□ -0.22
DDX39A-201ENST00000242776 KIAA0754O94854 1291 aa13.65□□□□□ -0.22
DDX39A-201ENST00000242776 TYRP1P17643 537 aa13.65□□□□□ -0.22
DDX39A-201ENST00000242776 RENBPP51606 427 aa13.65□□□□□ -0.22
DDX39A-201ENST00000242776 AIF1P55008 147 aa13.65□□□□□ -0.22
DDX39A-201ENST00000242776 SH3BP2P78314 561 aa13.65□□□□□ -0.22
DDX39A-201ENST00000242776 RFTN1Q14699 578 aaPredicted RBP13.65□□□□□ -0.22
DDX39A-201ENST00000242776 HADHQ16836 314 aaKnown RBP13.65□□□□□ -0.22
DDX39A-201ENST00000242776 LRRC66Q68CR7 880 aa13.65□□□□□ -0.22
DDX39A-201ENST00000242776 TCTN3Q6NUS6 607 aa13.65□□□□□ -0.22
DDX39A-201ENST00000242776 WDR74Q6RFH5 385 aaPredicted RBP13.65□□□□□ -0.22
DDX39A-201ENST00000242776 RASGRP3Q8IV61 690 aa13.65□□□□□ -0.22
DDX39A-201ENST00000242776 UBE2Q2Q8WVN8 375 aa13.65□□□□□ -0.22
DDX39A-201ENST00000242776 STAMBPL1Q96FJ0 436 aa13.65□□□□□ -0.22
DDX39A-201ENST00000242776 TRIM7Q9C029 511 aa13.65□□□□□ -0.22
DDX39A-201ENST00000242776 CASS4Q9NQ75 786 aa13.65□□□□□ -0.22
DDX39A-201ENST00000242776 DONSONQ9NYP3 566 aa13.65□□□□□ -0.22
DDX39A-201ENST00000242776 LUZP4Q9P127 313 aa13.65□□□□□ -0.22
DDX39A-201ENST00000242776 SHANK1Q9Y566 2161 aa13.65□□□□□ -0.22
DDX39A-201ENST00000242776 USP27XA6NNY8 438 aa13.64□□□□□ -0.23
DDX39A-201ENST00000242776 SPOPO43791 374 aa13.64□□□□□ -0.23
DDX39A-201ENST00000242776 PCK1P35558 622 aa13.64□□□□□ -0.23
DDX39A-201ENST00000242776 CHAF1BQ13112 559 aa13.64□□□□□ -0.23
DDX39A-201ENST00000242776 NADK2Q4G0N4 442 aa13.64□□□□□ -0.23
DDX39A-201ENST00000242776 ERMARDQ5T6L9 678 aa13.64□□□□□ -0.23
DDX39A-201ENST00000242776 USP45Q70EL2 814 aa13.64□□□□□ -0.23
DDX39A-201ENST00000242776 TECPR1Q7Z6L1 1165 aa13.64□□□□□ -0.23
DDX39A-201ENST00000242776 CBARPQ8N350 705 aaPredicted RBP13.64□□□□□ -0.23
DDX39A-201ENST00000242776 SCARF2Q96GP6 870 aaPredicted RBP13.64□□□□□ -0.23
DDX39A-201ENST00000242776 TGM7Q96PF1 710 aa13.64□□□□□ -0.23
DDX39A-201ENST00000242776 OR6C1Q96RD1 312 aa13.64□□□□□ -0.23
DDX39A-201ENST00000242776 NUDCD1Q96RS6 583 aa13.64□□□□□ -0.23
DDX39A-201ENST00000242776 RIOK2Q9BVS4 552 aaKnown RBP13.64□□□□□ -0.23
DDX39A-201ENST00000242776 TRIM55Q9BYV6 548 aa13.64□□□□□ -0.23
DDX39A-201ENST00000242776 KCTD5Q9NXV2 234 aa13.64□□□□□ -0.23
DDX39A-201ENST00000242776 LNPEPQ9UIQ6 1025 aa13.64□□□□□ -0.23
DDX39A-201ENST00000242776 CAPN6Q9Y6Q1 641 aa13.64□□□□□ -0.23
DDX39A-201ENST00000242776 GRID2IPA4D2P6 1211 aa13.63□□□□□ -0.23
DDX39A-201ENST00000242776 ENO4A6NNW6 628 aa13.63□□□□□ -0.23
DDX39A-201ENST00000242776 SOCS5O75159 536 aa13.63□□□□□ -0.23
DDX39A-201ENST00000242776 PGLSO95336 258 aa13.63□□□□□ -0.23
DDX39A-201ENST00000242776 PDHA1P08559 390 aa13.63□□□□□ -0.23
DDX39A-201ENST00000242776 NFKBIAP25963 317 aa13.63□□□□□ -0.23
DDX39A-201ENST00000242776 HTR7P34969 479 aa13.63□□□□□ -0.23
DDX39A-201ENST00000242776 SSR1P43307 286 aaKnown RBP13.63□□□□□ -0.23
DDX39A-201ENST00000242776 ITKQ08881 620 aa13.63□□□□□ -0.23
DDX39A-201ENST00000242776 ARMC12Q5T9G4 340 aa13.63□□□□□ -0.23
DDX39A-201ENST00000242776 ADAMTSL4Q6UY14 1074 aa13.63□□□□□ -0.23
DDX39A-201ENST00000242776 SLC9B2Q86UD5 537 aa13.63□□□□□ -0.23
DDX39A-201ENST00000242776 LZTR1Q8N653 840 aa13.63□□□□□ -0.23
DDX39A-201ENST00000242776 SCRN2Q96FV2 425 aa13.63□□□□□ -0.23
DDX39A-201ENST00000242776 RUFY1Q96T51 708 aa13.63□□□□□ -0.23
DDX39A-201ENST00000242776 ARFGAP3Q9NP61 516 aa13.63□□□□□ -0.23
DDX39A-201ENST00000242776 SARS2Q9NP81 518 aaKnown RBP13.63□□□□□ -0.23
DDX39A-201ENST00000242776 AMFRQ9UKV5 643 aa13.63□□□□□ -0.23
DDX39A-201ENST00000242776 TEP1Q99973 2627 aaKnown RBP13.63□□□□□ -0.23
DDX39A-201ENST00000242776 MED13Q9UHV7 2174 aa13.63□□□□□ -0.23
DDX39A-201ENST00000242776 PSMD11O00231 422 aa13.62□□□□□ -0.23
DDX39A-201ENST00000242776 PRPSAP2O60256 369 aa13.62□□□□□ -0.23
DDX39A-201ENST00000242776 LRCH4O75427 683 aa13.62□□□□□ -0.23
DDX39A-201ENST00000242776 RASSF9O75901 435 aa13.62□□□□□ -0.23
DDX39A-201ENST00000242776 COMTP21964 271 aa13.62□□□□□ -0.23
DDX39A-201ENST00000242776 AMPD1P23109 780 aa13.62□□□□□ -0.23
DDX39A-201ENST00000242776 PTSQ03393 145 aa13.62□□□□□ -0.23
DDX39A-201ENST00000242776 DPTQ07507 201 aa13.62□□□□□ -0.23
DDX39A-201ENST00000242776 EIF2S3LQ2VIR3 472 aaKnown RBP13.62□□□□□ -0.23
DDX39A-201ENST00000242776 PLA2G4EQ3MJ16 856 aa13.62□□□□□ -0.23
DDX39A-201ENST00000242776 PRR30Q53SZ7 412 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms