RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 PSME2Q9UL46 239 aa10.92□□□□□ -0.66
COPA-201ENST00000241704 GPSM3Q9Y4H4 160 aa10.92□□□□□ -0.66
COPA-201ENST00000241704 TAF1P21675 1872 aa10.92□□□□□ -0.66
COPA-201ENST00000241704 COL6A1P12109 1028 aa10.92□□□□□ -0.66
COPA-201ENST00000241704 CDH5P33151 784 aaPredicted RBP10.92□□□□□ -0.66
COPA-201ENST00000241704 ANXA11P50995 505 aaKnown RBP10.92□□□□□ -0.66
COPA-201ENST00000241704 CNTN1Q12860 1018 aa10.92□□□□□ -0.66
COPA-201ENST00000241704 IRF5Q13568 498 aa10.92□□□□□ -0.66
COPA-201ENST00000241704 ANKDD1AQ495B1 522 aa10.92□□□□□ -0.66
COPA-201ENST00000241704 IL23RQ5VWK5 629 aa10.92□□□□□ -0.66
COPA-201ENST00000241704 SLC41A1Q8IVJ1 513 aa10.92□□□□□ -0.66
COPA-201ENST00000241704 NKAPQ8N5F7 415 aaKnown RBP10.92□□□□□ -0.66
COPA-201ENST00000241704 STAG3L4Q8TBR4 150 aa10.92□□□□□ -0.66
COPA-201ENST00000241704 RORBQ92753 470 aa10.92□□□□□ -0.66
COPA-201ENST00000241704 ARHGAP39Q9C0H5 1083 aa10.92□□□□□ -0.66
COPA-201ENST00000241704 GPR88Q9GZN0 384 aa10.92□□□□□ -0.66
COPA-201ENST00000241704 SIRPGQ9P1W8 387 aa10.92□□□□□ -0.66
COPA-201ENST00000241704 CDC14AQ9UNH5 594 aa10.92□□□□□ -0.66
COPA-201ENST00000241704 CACNB4O00305 520 aaPredicted RBP10.91□□□□□ -0.66
COPA-201ENST00000241704 CCRL2O00421 344 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 TACR2P21452 398 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 KELP23276 732 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 MAPK1P28482 360 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 TTPAP49638 278 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 PLK1P53350 603 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 RAB10P61026 200 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 NEK5Q6P3R8 708 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 AFTPHQ6ULP2 937 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 SLC44A2Q8IWA5 706 aaPredicted RBP10.91□□□□□ -0.66
COPA-201ENST00000241704 ZNF567Q8N184 647 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 CBR4Q8N4T8 237 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 SLC15A4Q8N697 577 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 GRPEL2Q8TAA5 225 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 SPACA7Q96KW9 195 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 GBA3Q9H227 469 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 POMKQ9H5K3 350 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 MID1IP1Q9NPA3 183 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 TRPV5Q9NQA5 729 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 SCN7AQ01118 1682 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.91□□□□□ -0.66
COPA-201ENST00000241704 CENPBD1B2RD01 187 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 ALOX12P18054 663 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 LPOP22079 712 aaPredicted RBP10.91□□□□□ -0.66
COPA-201ENST00000241704 NR4A1P22736 598 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 ATP5F1P24539 256 aaPredicted RBP10.91□□□□□ -0.66
COPA-201ENST00000241704 GCAP28676 217 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 SOX11P35716 441 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 ST13P50502 369 aaKnown RBP10.91□□□□□ -0.66
COPA-201ENST00000241704 HNRNPFP52597 415 aaKnown RBP10.91□□□□□ -0.66
COPA-201ENST00000241704 NDST2P52849 883 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 ERVK-21P61565 698 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 CTBP1Q13363 440 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 HERC3Q15034 1050 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 CLPPQ16740 277 aaPredicted RBP10.91□□□□□ -0.66
COPA-201ENST00000241704 ZFP69Q49AA0 526 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 OR56A4Q8NGH8 313 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 OR6K2Q8NGY2 324 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 ZNF347Q96SE7 839 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 ACOX2Q99424 681 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 HERC2P3Q9BVR0 1158 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 SOHLH2Q9NX45 425 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 PIRO00625 290 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 AQP9O43315 295 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 MED26O95402 600 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 FUCA1P04066 466 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 ELFN1P0C7U0 828 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 RFC2P35250 354 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 TRIP4Q15650 581 aaPredicted RBP10.91□□□□□ -0.66
COPA-201ENST00000241704 STXBP5Q5T5C0 1151 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 SYPL2Q5VXT5 272 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 TXNRD3NBQ6F5E7 133 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 OTOP3Q7RTS5 596 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 GLIS1Q8NBF1 620 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 HDAC10Q969S8 669 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 BDH2Q9BUT1 245 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 ACE2Q9BYF1 805 aaPredicted RBP10.91□□□□□ -0.66
COPA-201ENST00000241704 AGO3Q9H9G7 860 aaKnown RBP10.91□□□□□ -0.66
COPA-201ENST00000241704 SNX15Q9NRS6 342 aa10.91□□□□□ -0.66
COPA-201ENST00000241704 HNRNPCL2B2RXH8 293 aa10.9□□□□□ -0.66
COPA-201ENST00000241704 MATN3O15232 486 aa10.9□□□□□ -0.66
COPA-201ENST00000241704 ACSL4O60488 711 aa10.9□□□□□ -0.66
COPA-201ENST00000241704 RNASEH2AO75792 299 aaKnown RBP10.9□□□□□ -0.66
COPA-201ENST00000241704 MT-CO1P00395 513 aa10.9□□□□□ -0.66
COPA-201ENST00000241704 EPHA3P29320 983 aa10.9□□□□□ -0.66
COPA-201ENST00000241704 GDF10P55107 478 aa10.9□□□□□ -0.66
COPA-201ENST00000241704 FASTKQ14296 549 aaKnown RBP10.9□□□□□ -0.66
COPA-201ENST00000241704 OTUD3Q5T2D3 398 aaPredicted RBP10.9□□□□□ -0.66
COPA-201ENST00000241704 TUBA3EQ6PEY2 450 aa10.9□□□□□ -0.66
COPA-201ENST00000241704 SCAMP5Q8TAC9 235 aa10.9□□□□□ -0.66
COPA-201ENST00000241704 PXYLP1Q8TE99 480 aa10.9□□□□□ -0.66
COPA-201ENST00000241704 AUTS2Q8WXX7 1259 aa10.9□□□□□ -0.66
COPA-201ENST00000241704 LPGAT1Q92604 370 aa10.9□□□□□ -0.66
COPA-201ENST00000241704 CITED4Q96RK1 184 aa10.9□□□□□ -0.66
COPA-201ENST00000241704 NPAS2Q99743 824 aa10.9□□□□□ -0.66
COPA-201ENST00000241704 RHOJQ9H4E5 214 aa10.9□□□□□ -0.66
COPA-201ENST00000241704 MIEF1Q9NQG6 463 aa10.9□□□□□ -0.66
COPA-201ENST00000241704 SACM1LQ9NTJ5 587 aa10.9□□□□□ -0.66
COPA-201ENST00000241704 POLG2Q9UHN1 485 aa10.9□□□□□ -0.66
COPA-201ENST00000241704 ST14Q9Y5Y6 855 aa10.9□□□□□ -0.66
COPA-201ENST00000241704 PTPRZ1P23471 2315 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms