RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 KRT36O76013 467 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 IL33O95760 270 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 THP07101 528 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 MYL3P08590 195 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 SRGAP2BP0DMP2 458 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 ERVK-10P10266 1014 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 ACAT1P24752 427 aaKnown RBP7.91□□□□□ -1.14
CXCR4-201ENST00000241393 CPOXP36551 454 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 MLH1P40692 756 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 CSRP3P50461 194 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 MRPS6P82932 125 aaKnown RBP7.91□□□□□ -1.14
CXCR4-201ENST00000241393 ARHGAP8P85298 464 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 CDH17Q12864 832 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 MPP3Q13368 585 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 FSCBQ5H9T9 825 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 SNX30Q5VWJ9 437 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 IRGCQ6NXR0 463 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 LRRC74BQ6ZQY2 392 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 BHLHA9Q7RTU4 235 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 RSPH3Q86UC2 560 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 C10orf107Q8IVU9 208 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 CMIPQ8IY22 773 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 ULK2Q8IYT8 1036 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 UNC5BQ8IZJ1 945 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 MIER2Q8N344 545 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 CCDC33Q8N5R6 958 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 DNAAF3Q8N9W5 541 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 RNF169Q8NCN4 708 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 ZMIZ2Q8NF64 920 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 OR52K1Q8NGK4 314 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 WDR60Q8WVS4 1066 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 JPH3Q8WXH2 748 aaPredicted RBP7.91□□□□□ -1.14
CXCR4-201ENST00000241393 GFM2Q969S9 779 aaKnown RBP7.91□□□□□ -1.14
CXCR4-201ENST00000241393 CMTM5Q96DZ9 223 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 HSPBAP1Q96EW2 488 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 PCED1BQ96HM7 432 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 ZNF778Q96MU6 729 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 SORT1Q99523 831 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 SYT17Q9BSW7 474 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 KIFC1Q9BW19 673 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 ACE2Q9BYF1 805 aaPredicted RBP7.91□□□□□ -1.14
CXCR4-201ENST00000241393 OSBPL6Q9BZF3 934 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 WDCPQ9H6R7 721 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 NMRK1Q9NWW6 199 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 DDIT4Q9NX09 232 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 DONSONQ9NYP3 566 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 TMEM216Q9P0N5 145 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 MARCOQ9UEW3 520 aaPredicted RBP7.91□□□□□ -1.14
CXCR4-201ENST00000241393 DPP7Q9UHL4 492 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 RNF114Q9Y508 228 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 TRPV2Q9Y5S1 764 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 NR2E3Q9Y5X4 410 aa7.91□□□□□ -1.14
CXCR4-201ENST00000241393 MYO18AQ92614 2054 aaKnown RBP7.9□□□□□ -1.14
CXCR4-201ENST00000241393 SYNJ2BP-COX16A0A087WUM0 186 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 ARHGEF37A1IGU5 675 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 FAM72CH0Y354 149 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 H0Y3Z8 333 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 ZNF195O14628 629 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 SLC22A2O15244 555 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 ITM2AO43736 263 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 CCNT2O60583 730 aaKnown RBP7.9□□□□□ -1.14
CXCR4-201ENST00000241393 TBX10O75333 385 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 LPLP06858 475 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 KITP10721 976 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 ODC1P11926 461 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 HOXC13P31276 330 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 NUMBP49757 651 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 MEOX1P50221 254 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 COPAP53621 1224 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 ALDH18A1P54886 795 aaKnown RBP7.9□□□□□ -1.14
CXCR4-201ENST00000241393 AP2B1P63010 937 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 PURAQ00577 322 aaKnown RBP7.9□□□□□ -1.14
CXCR4-201ENST00000241393 BTKQ06187 659 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 KLC1Q07866 573 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 MESP2Q0VG99 397 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 THOC5Q13769 683 aaKnown RBP7.9□□□□□ -1.14
CXCR4-201ENST00000241393 RCN2Q14257 317 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 MAPRE1Q15691 268 aaKnown RBP7.9□□□□□ -1.14
CXCR4-201ENST00000241393 UGP2Q16851 508 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 BRMS1LQ5PSV4 323 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 FAM72AQ5TYM5 149 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 BSPRYQ5W0U4 402 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 TMEM200BQ69YZ2 307 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 PDPK2PQ6A1A2 396 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 FAM72DQ6L9T8 149 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 ZCCHC23Q6ZST2 131 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 MRPL10Q7Z7H8 261 aaKnown RBP7.9□□□□□ -1.14
CXCR4-201ENST00000241393 SAPCD2Q86UD0 394 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 FAM72BQ86X60 149 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 MYLK4Q86YV6 388 aaPredicted RBP7.9□□□□□ -1.14
CXCR4-201ENST00000241393 LRRC49Q8IUZ0 686 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 TMEFF1Q8IYR6 380 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 NPWQ8N729 165 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 SOCS4Q8WXH5 440 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 JADE3Q92613 823 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 GPR22Q99680 433 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 PTPN18Q99952 460 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 EBF4Q9BQW3 602 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 ACBD6Q9BR61 282 aa7.9□□□□□ -1.14
CXCR4-201ENST00000241393 MLPHQ9BV36 600 aaPredicted RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms