RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 FBXO16Q8IX29 292 aaPredicted RBP13.77□□□□□ -0.21
TARDBP-201ENST00000240185 AKAP1Q92667 903 aaKnown RBP eCLIP13.77□□□□□ -0.21
TARDBP-201ENST00000240185 UFD1Q92890 307 aa13.77□□□□□ -0.21
TARDBP-201ENST00000240185 AP1S3Q96PC3 154 aa13.77□□□□□ -0.21
TARDBP-201ENST00000240185 PXMP2Q9NR77 195 aa13.77□□□□□ -0.21
TARDBP-201ENST00000240185 DCDC2CA8MYV0 355 aa13.77□□□□□ -0.21
TARDBP-201ENST00000240185 VARSP26640 1264 aaKnown RBP13.77□□□□□ -0.21
TARDBP-201ENST00000240185 FAM156AQ8NDB6 213 aa13.77□□□□□ -0.21
TARDBP-201ENST00000240185 XAGE5Q8WWM1 108 aa13.77□□□□□ -0.21
TARDBP-201ENST00000240185 GAL3ST1Q99999 423 aa13.77□□□□□ -0.21
TARDBP-201ENST00000240185 ACSS2Q9NR19 701 aa13.77□□□□□ -0.21
TARDBP-201ENST00000240185 FKBP7Q9Y680 259 aa13.77□□□□□ -0.21
TARDBP-201ENST00000240185 DCLK1O15075 740 aa13.77□□□□□ -0.21
TARDBP-201ENST00000240185 PRDX6P30041 224 aa13.77□□□□□ -0.21
TARDBP-201ENST00000240185 ZNF517Q6ZMY9 492 aaPredicted RBP13.77□□□□□ -0.21
TARDBP-201ENST00000240185 ASB18Q6ZVZ8 466 aa13.77□□□□□ -0.21
TARDBP-201ENST00000240185 TXNRD3Q86VQ6 643 aa13.77□□□□□ -0.21
TARDBP-201ENST00000240185 MAP4K3Q8IVH8 894 aa13.77□□□□□ -0.21
TARDBP-201ENST00000240185 GTPBP3Q969Y2 492 aaKnown RBP13.77□□□□□ -0.21
TARDBP-201ENST00000240185 ZNF570Q96NI8 536 aa13.77□□□□□ -0.21
TARDBP-201ENST00000240185 PDCD2LQ9BRP1 358 aa13.77□□□□□ -0.21
TARDBP-201ENST00000240185 AARSD1Q9BTE6 412 aaKnown RBP13.77□□□□□ -0.21
TARDBP-201ENST00000240185 MROH8Q9H579 483 aa13.77□□□□□ -0.21
TARDBP-201ENST00000240185 LRTM1Q9HBL6 345 aa13.77□□□□□ -0.21
TARDBP-201ENST00000240185 MARCH2Q9P0N8 246 aa13.77□□□□□ -0.21
TARDBP-201ENST00000240185 GULP1Q9UBP9 304 aa13.77□□□□□ -0.21
TARDBP-201ENST00000240185 ZNF490Q9ULM2 529 aaPredicted RBP13.77□□□□□ -0.21
TARDBP-201ENST00000240185 NLRP1Q9C000 1473 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 FXYD6-FXYD2A0A087WZ82 144 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 URADA6NGE7 173 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 J3QRK9 145 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 SCELO95171 688 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 ITPKBP27987 946 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 MCCD1P59942 119 aaPredicted RBP13.76□□□□□ -0.21
TARDBP-201ENST00000240185 TOR1AIP1Q5JTV8 583 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 RNF180Q86T96 592 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 FAM71AQ8IYT1 594 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 SMG8Q8ND04 991 aaKnown RBP13.76□□□□□ -0.21
TARDBP-201ENST00000240185 SRFBP1Q8NEF9 429 aaKnown RBP13.76□□□□□ -0.21
TARDBP-201ENST00000240185 OR4L1Q8NH43 312 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 HEXDCQ8WVB3 486 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 MAFIPQ8WZ33 124 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 FBXL8Q96CD0 374 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 C2orf49Q9BVC5 232 aaPredicted RBP13.76□□□□□ -0.21
TARDBP-201ENST00000240185 SLC39A8Q9C0K1 460 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 FXYD6Q9H0Q3 95 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 POLR3BQ9NW08 1133 aaPredicted RBP13.76□□□□□ -0.21
TARDBP-201ENST00000240185 CFL2Q9Y281 166 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 E9PCH4 1651 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 ANXA2P2A6NMY6 339 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 ANKRD63C9JTQ0 380 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 PPM1BO75688 479 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 ANXA2P07355 339 aaKnown RBP13.76□□□□□ -0.21
TARDBP-201ENST00000240185 PEPDP12955 493 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 POU2F1P14859 743 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 GOT1P17174 413 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 SLC12A3P55017 1021 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 CDH12P55289 794 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 MAB21L1Q13394 359 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 SLC27A1Q6PCB7 646 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 POTEHQ6S545 545 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 BPIFB1Q8TDL5 484 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 TWIST2Q8WVJ9 160 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 SEC14L1Q92503 715 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 ALG3Q92685 438 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 SLC38A4Q969I6 547 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 C12orf65Q9H3J6 166 aaKnown RBP13.76□□□□□ -0.21
TARDBP-201ENST00000240185 HSPB11Q9Y547 144 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 TISP43B9A030 160 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 ACKR2O00590 384 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 XKRYO14609 159 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 FPGTO14772 594 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 C9orf64Q5T6V5 341 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 AADACL4Q5VUY2 407 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 CYP2W1Q8TAV3 490 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 ADAMTS15Q8TE58 950 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 LPIN3Q9BQK8 851 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 POLR2J2Q9GZM3 115 aaKnown RBP13.76□□□□□ -0.21
TARDBP-201ENST00000240185 RIOX1Q9H6W3 641 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 C11orf16Q9NQ32 467 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 TAS2R1Q9NYW7 299 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 MADDQ8WXG6 1647 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 H3BNH8 94 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 ACOX3O15254 700 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 SLC15A1P46059 708 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 ACSBG2Q5FVE4 666 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 ARL13AQ5H913 290 aaPredicted RBP13.76□□□□□ -0.21
TARDBP-201ENST00000240185 METTL7BQ6UX53 244 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 FAM35AQ86V20 835 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 SLC22A16Q86VW1 577 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 CFAP206Q8IYR0 622 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 TTLL2Q9BWV7 592 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 BRD9Q9H8M2 597 aa13.76□□□□□ -0.21
TARDBP-201ENST00000240185 SUCOQ9UBS9 1254 aaKnown RBP13.76□□□□□ -0.21
TARDBP-201ENST00000240185 DNAJA2O60884 412 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 FAM155BO75949 473 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 LPOP22079 712 aaPredicted RBP13.75□□□□□ -0.21
TARDBP-201ENST00000240185 ACSL1P33121 698 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 FMO1Q01740 532 aa13.75□□□□□ -0.21
TARDBP-201ENST00000240185 DNASE1L3Q13609 305 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms