RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 PTPRQQ9UMZ3 2332 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 ATRXP46100 2492 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 KLHL33A6NCF5 533 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 C3orf70A6NLC5 250 aaPredicted RBP12.61□□□□□ -0.39
PDZD11-201ENST00000239666 K7ENP7 123 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 GRID2O43424 1007 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 NUAK1O60285 661 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 CST8O60676 142 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 STK10O94804 968 aaKnown RBP12.61□□□□□ -0.39
PDZD11-201ENST00000239666 MAP3K6O95382 1288 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 POLD2P49005 469 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 PPM1FP49593 454 aaPredicted RBP12.61□□□□□ -0.39
PDZD11-201ENST00000239666 ATP1A2P50993 1020 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 PDX1P52945 283 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 LIMK2P53671 638 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 TBX2Q13207 712 aaPredicted RBP12.61□□□□□ -0.39
PDZD11-201ENST00000239666 GTF2H3Q13889 308 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 TCEA2Q15560 299 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 C11orf63Q6NUN7 778 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 TMEM71Q6P5X7 295 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 INO80CQ6PI98 192 aaPredicted RBP12.61□□□□□ -0.39
PDZD11-201ENST00000239666 WDR74Q6RFH5 385 aaPredicted RBP12.61□□□□□ -0.39
PDZD11-201ENST00000239666 CHST15Q7LFX5 561 aaPredicted RBP12.61□□□□□ -0.39
PDZD11-201ENST00000239666 TMC3Q7Z5M5 1100 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 SLITRK4Q8IW52 837 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 RBM12BQ8IXT5 1001 aaKnown RBP12.61□□□□□ -0.39
PDZD11-201ENST00000239666 KATNAL2Q8IYT4 538 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 NAGSQ8N159 534 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 SFRP1Q8N474 314 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 CNTD1Q8N815 330 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 RNF214Q8ND24 703 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 CCL4L1Q8NHW4 92 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 TAAR9Q96RI9 348 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 SPATA16Q9BXB7 569 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 FOXP3Q9BZS1 431 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 SUDS3Q9H7L9 328 aaPredicted RBP12.61□□□□□ -0.39
PDZD11-201ENST00000239666 GLOD4Q9HC38 313 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 TMEM98Q9Y2Y6 226 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 CELSR3Q9NYQ7 3312 aa12.61□□□□□ -0.39
PDZD11-201ENST00000239666 ZFC3H1O60293 1989 aaKnown RBP12.61□□□□□ -0.39
PDZD11-201ENST00000239666 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.6□□□□□ -0.39
PDZD11-201ENST00000239666 STMND1H3BQB6 276 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 KMOO15229 486 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 INPP4BO15327 924 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 B4GAT1O43505 415 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 ANXA9O76027 345 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 SOD1P00441 154 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 MMP2P08253 660 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 F3P13726 295 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 HLA-DPA1P20036 260 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 AK4P27144 223 aaPredicted RBP12.6□□□□□ -0.39
PDZD11-201ENST00000239666 CD1CP29017 333 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 HMGCLP35914 325 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 CDKN2BP42772 138 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 PDE1BQ01064 536 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 HHEXQ03014 270 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 MPP3Q13368 585 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 PPP2R5EQ16537 467 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 TAZQ16635 292 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 AMZ1Q400G9 498 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 ARHGAP40Q5TG30 622 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 CCDC181Q5TID7 509 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 ITPRIPL1Q6GPH6 555 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 IYDQ6PHW0 289 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 DAAM2Q86T65 1068 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 PLXDC1Q8IUK5 500 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 CCDC50Q8IVM0 306 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 PELI3Q8N2H9 469 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 MEIOBQ8N635 442 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 VPS35Q96QK1 796 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 PANX2Q96RD6 677 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 C19orf43Q9BQ61 176 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 EFHD1Q9BUP0 239 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 CAAP1Q9H8G2 361 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 UCK1Q9HA47 277 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 PISDQ9UG56 409 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 AAR2Q9Y312 384 aaKnown RBP12.6□□□□□ -0.39
PDZD11-201ENST00000239666 PCDHGA3Q9Y5H0 932 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 PCDHA13Q9Y5I0 950 aa12.6□□□□□ -0.39
PDZD11-201ENST00000239666 DNMT3AQ9Y6K1 912 aaPredicted RBP12.6□□□□□ -0.39
PDZD11-201ENST00000239666 COL27A1Q8IZC6 1860 aaPredicted RBP12.59□□□□□ -0.39
PDZD11-201ENST00000239666 IGHV1OR21-1A0A087WYE8 117 aa12.59□□□□□ -0.39
PDZD11-201ENST00000239666 CCDC66A2RUB6 948 aa12.59□□□□□ -0.39
PDZD11-201ENST00000239666 B4E171 279 aa12.59□□□□□ -0.39
PDZD11-201ENST00000239666 DNAJC6O75061 913 aa12.59□□□□□ -0.39
PDZD11-201ENST00000239666 FUCA1P04066 466 aa12.59□□□□□ -0.39
PDZD11-201ENST00000239666 ITGB2P05107 769 aa12.59□□□□□ -0.39
PDZD11-201ENST00000239666 PYGMP11217 842 aa12.59□□□□□ -0.39
PDZD11-201ENST00000239666 TNNT1P13805 278 aa12.59□□□□□ -0.39
PDZD11-201ENST00000239666 CTNNA2P26232 953 aa12.59□□□□□ -0.39
PDZD11-201ENST00000239666 TSPAN7P41732 249 aa12.59□□□□□ -0.39
PDZD11-201ENST00000239666 MAZP56270 477 aaKnown RBP12.59□□□□□ -0.39
PDZD11-201ENST00000239666 OR1D5P58170 312 aa12.59□□□□□ -0.39
PDZD11-201ENST00000239666 DYNLT1P63172 113 aa12.59□□□□□ -0.39
PDZD11-201ENST00000239666 ZBTB17Q13105 803 aa12.59□□□□□ -0.39
PDZD11-201ENST00000239666 ITGA9Q13797 1035 aa12.59□□□□□ -0.39
PDZD11-201ENST00000239666 PRPSAP1Q14558 356 aa12.59□□□□□ -0.39
PDZD11-201ENST00000239666 PRKD1Q15139 912 aaPredicted RBP12.59□□□□□ -0.39
PDZD11-201ENST00000239666 MANEAQ5SRI9 462 aa12.59□□□□□ -0.39
PDZD11-201ENST00000239666 MFSD7Q6UXD7 560 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms