RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 UBR7Q8N806 425 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 SCAIQ8N9R8 606 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 SIDT2Q8NBJ9 832 aaKnown RBP13.29□□□□□ -0.28
NEK4-201ENST00000233027 TEFMQ96QE5 360 aaKnown RBP13.29□□□□□ -0.28
NEK4-201ENST00000233027 CITED4Q96RK1 184 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 LPIN3Q9BQK8 851 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 PDZD7Q9H5P4 517 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 LRRC14BA6NHZ5 514 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 TNFRSF11BO00300 401 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 LYPLA2O95372 231 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 ANGPTL1O95841 491 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 COL6A1P12109 1028 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 EFNA1P20827 205 aaPredicted RBP13.29□□□□□ -0.28
NEK4-201ENST00000233027 FOXN2P32314 431 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 GTF2H2Q13888 395 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 PLEKHG4Q58EX7 1191 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 OLFML2AQ68BL7 652 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 GTF2H2CQ6P1K8 395 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 KCTD8Q6ZWB6 473 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 ARL10Q8N8L6 244 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 ART5Q96L15 291 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 COQ10BQ9H8M1 238 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 APOBEC3GQ9HC16 384 aaKnown RBP13.29□□□□□ -0.28
NEK4-201ENST00000233027 EVLQ9UI08 416 aaPredicted RBP13.29□□□□□ -0.28
NEK4-201ENST00000233027 NOCTQ9UK39 431 aaKnown RBP13.29□□□□□ -0.28
NEK4-201ENST00000233027 ECDO95905 644 aaPredicted RBP13.29□□□□□ -0.28
NEK4-201ENST00000233027 GOT2P00505 430 aaKnown RBP13.29□□□□□ -0.28
NEK4-201ENST00000233027 ZNF24P17028 368 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 CCR3P51677 355 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 SKP1P63208 163 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 SLC9B1Q4ZJI4 515 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 PIGWQ7Z7B1 504 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 BANPQ8N9N5 519 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 DNAJC1Q96KC8 554 aaKnown RBP13.29□□□□□ -0.28
NEK4-201ENST00000233027 MARCH7Q9H992 704 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 DERAQ9Y315 318 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 SMIM28A0A1B0GU29 152 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 CCDC162PA2VCL2 907 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 GCATO75600 419 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 SLC35G4P0C7Q5 338 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 SLC5A3P53794 718 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 SRSF11Q05519 484 aaKnown RBP13.29□□□□□ -0.28
NEK4-201ENST00000233027 PUDPQ08623 228 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 CBX3Q13185 183 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 C5orf22Q49AR2 442 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 CNTD1Q8N815 330 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 HEXDCQ8WVB3 486 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 HMCESQ96FZ2 354 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 SEMA3GQ9NS98 782 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 PCDHGC3Q9UN70 934 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 C1QTNF3-AMACRE9PGA6 284 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 PGRMC2O15173 223 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 PLIN3O60664 434 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 ATG10Q9H0Y0 220 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 ARHGEF4Q9NR80 690 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 MFHAS1Q9Y4C4 1052 aa13.29□□□□□ -0.28
NEK4-201ENST00000233027 POU2F1P14859 743 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 RBBP4Q09028 425 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 CBX2Q14781 532 aaPredicted RBP13.28□□□□□ -0.28
NEK4-201ENST00000233027 PCBP1Q15365 356 aaKnown RBP eCLIP13.28□□□□□ -0.28
NEK4-201ENST00000233027 PPP1R15BQ5SWA1 713 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 ZNF730Q6ZMV8 503 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 TRPM4Q8TD43 1214 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 CLP1Q92989 425 aaKnown RBP13.28□□□□□ -0.28
NEK4-201ENST00000233027 ESAMQ96AP7 390 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 CHCHD6Q9BRQ6 235 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 UNC93B1Q9H1C4 597 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 IMP3Q9NV31 184 aaKnown RBP13.28□□□□□ -0.28
NEK4-201ENST00000233027 MYPNQ86TC9 1320 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 SHPRHQ149N8 1683 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 QSOX1O00391 747 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 OR4F21O95013 312 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 MMP3P08254 477 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 MXD1Q05195 221 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 ACAP2Q15057 778 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 KCNA10Q16322 511 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 CCNYL2Q5T2Q4 361 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 TRMT10BQ6PF06 316 aaKnown RBP13.28□□□□□ -0.28
NEK4-201ENST00000233027 FAM124AQ86V42 546 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 UBE2J2Q8N2K1 259 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 PPTC7Q8NI37 304 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 PHF12Q96QT6 1004 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 TMEM109Q9BVC6 243 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 MRIQ9BWK5 157 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 C11orf16Q9NQ32 467 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 ZNF221Q9UK13 617 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 DHRS7Q9Y394 339 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 OAS3Q9Y6K5 1087 aaKnown RBP13.28□□□□□ -0.28
NEK4-201ENST00000233027 MYOM1P52179 1685 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 PPIBP23284 216 aaKnown RBP13.28□□□□□ -0.28
NEK4-201ENST00000233027 ITGA3P26006 1051 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 KIR3DL1P43629 444 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 SNAPC1Q16533 368 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 PGBD2Q6P3X8 592 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 ADGRG2Q8IZP9 1017 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 MPP5Q8N3R9 675 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 OR10A6Q8NH74 314 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 KLRG2A4D1S0 409 aaPredicted RBP13.28□□□□□ -0.28
NEK4-201ENST00000233027 C5orf60A6NFR6 353 aa13.28□□□□□ -0.28
NEK4-201ENST00000233027 H7C0S8 307 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms