RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 PPP1R16AQ96I34 528 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 LRIG1Q96JA1 1093 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 MRGPRX3Q96LB0 322 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 CCT8L2Q96SF2 557 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 TCF12Q99081 682 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 NDNQ99608 321 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 TTYH1Q9H313 450 aaPredicted RBP9.7□□□□□ -0.86
TTC1-201ENST00000231238 C12orf65Q9H3J6 166 aaKnown RBP9.7□□□□□ -0.86
TTC1-201ENST00000231238 FAM96AQ9H5X1 160 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 SRA1Q9HD15 236 aaKnown RBP9.7□□□□□ -0.86
TTC1-201ENST00000231238 INTS10Q9NVR2 710 aaKnown RBP9.7□□□□□ -0.86
TTC1-201ENST00000231238 PKD2L2Q9NZM6 624 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 MARCH4Q9P2E8 410 aaPredicted RBP9.7□□□□□ -0.86
TTC1-201ENST00000231238 CRLS1Q9UJA2 301 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 APPL1Q9UKG1 709 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 CORO1CQ9ULV4 474 aaPredicted RBP9.7□□□□□ -0.86
TTC1-201ENST00000231238 PLLPQ9Y342 182 aa9.7□□□□□ -0.86
TTC1-201ENST00000231238 A0A087X1B8 175 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 GLYATL1P3A0A0U1RQE8 302 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 OTOL1A6NHN0 477 aaPredicted RBP9.69□□□□□ -0.86
TTC1-201ENST00000231238 PRRT4C9JH25 899 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 E5RI56 91 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 NEMP1O14524 444 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 RHOBTB1O94844 696 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 IL1BP01584 269 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 APOA4P06727 396 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 EPHX1P07099 455 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 HLA-EP13747 358 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 EDN3P14138 238 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 KCNA5P22460 613 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 NOS3P29474 1203 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 HMGCLP35914 325 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 SPAM1P38567 509 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 EIF2DP41214 584 aaKnown RBP9.69□□□□□ -0.86
TTC1-201ENST00000231238 STC1P52823 247 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 SEMG2Q02383 582 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 ZNF234Q14588 700 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 PTPRRQ15256 657 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 CCDC85BQ15834 202 aaPredicted RBP9.69□□□□□ -0.86
TTC1-201ENST00000231238 PDK4Q16654 411 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 INSCQ1MX18 579 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 RSPO4Q2I0M5 234 aaPredicted RBP9.69□□□□□ -0.86
TTC1-201ENST00000231238 CCDC153Q494R4 210 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 ZNF805Q5CZA5 627 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 LRRC73Q5JTD7 316 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 HECTD2Q5U5R9 776 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 GKAP1Q5VSY0 366 aaPredicted RBP9.69□□□□□ -0.86
TTC1-201ENST00000231238 ZDHHC20Q5W0Z9 365 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 ATG16L1Q676U5 607 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 SDE2Q6IQ49 451 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 FAM47EQ6ZV65 393 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 GALNT7Q86SF2 657 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 LRRC34Q8IZ02 419 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 CHPFQ8IZ52 775 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 STK40Q8N2I9 435 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 KDM1BQ8NB78 822 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 DENND1AQ8TEH3 1009 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 FRS2Q8WU20 508 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 WFDC12Q8WWY7 111 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 PPM1EQ8WY54 764 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 MSLNLQ96KJ4 702 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 SSBP4Q9BWG4 385 aaPredicted RBP9.69□□□□□ -0.86
TTC1-201ENST00000231238 PITPNM3Q9BZ71 974 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 MTG2Q9H4K7 406 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 CCDC134Q9H6E4 229 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 ASB8Q9H765 288 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 MANSC1Q9H8J5 431 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 IL17CQ9P0M4 197 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 SUN2Q9UH99 717 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 RUVBL2Q9Y230 463 aaKnown RBP9.69□□□□□ -0.86
TTC1-201ENST00000231238 VWA7Q9Y334 891 aa9.69□□□□□ -0.86
TTC1-201ENST00000231238 A0A0U1RQS6 177 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 NPIPB15A6NHN6 443 aaPredicted RBP9.68□□□□□ -0.86
TTC1-201ENST00000231238 UPK3BL1B0FP48 263 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 UPK3BL2E5RIL1 263 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 C1QTNF3-AMACRE9PGA6 284 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 SYNCRIPO60506 623 aaKnown RBP9.68□□□□□ -0.86
TTC1-201ENST00000231238 RNASEH1O60930 286 aaKnown RBP9.68□□□□□ -0.86
TTC1-201ENST00000231238 PRAMEF1O95521 474 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 PYGLP06737 847 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 GABRB3P28472 473 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 FMO4P31512 558 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 VIPR1P32241 457 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 LTBRP36941 435 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 OPRD1P41143 372 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 TAS2R39P59534 338 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 ELAVL3Q14576 367 aaKnown RBP9.68□□□□□ -0.86
TTC1-201ENST00000231238 FAM83EQ2M2I3 478 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 TSNAXIP1Q2TAA8 658 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 HNRNPA1L2Q32P51 320 aaKnown RBP9.68□□□□□ -0.86
TTC1-201ENST00000231238 NKAPLQ5M9Q1 402 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 RBM20Q5T481 1227 aaKnown RBP9.68□□□□□ -0.86
TTC1-201ENST00000231238 LYPLAL1Q5VWZ2 237 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 LRRC66Q68CR7 880 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 FBXL19Q6PCT2 694 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 CRTC1Q6UUV9 634 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 CERS6Q6ZMG9 384 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 CDHR3Q6ZTQ4 885 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 LCA5Q86VQ0 697 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 ANKS4BQ8N8V4 417 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms