RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 ASNA1O43681 348 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 IDH3BO43837 385 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 SRP72O76094 671 aaKnown RBP9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 PARNO95453 639 aaKnown RBP9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 PEX11BO96011 259 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 ITGB1P05556 798 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 IMPDH1P20839 514 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 GPX3P22352 226 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 IDUAP35475 653 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 IL1RL1Q01638 556 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 ZNF33AQ06730 810 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 CCL14Q16627 93 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 UPP1Q16831 310 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 KIF19Q2TAC6 998 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 WDR45BQ5MNZ6 344 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 SDHAF4Q5VUM1 108 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 RFPL4BQ6ZWI9 263 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 GET4Q7L5D6 327 aaPredicted RBP9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 AKAP14Q86UN6 197 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 PCYOX1LQ8NBM8 494 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 GLMNQ92990 594 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 PABPC5Q96DU9 382 aaKnown RBP9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 C19orf60Q96EN9 201 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 SMOXQ9NWM0 555 aa9.35□□□□□ -0.91
HLA-DOA-201ENST00000229829 A0A0J9YYE9 177 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 MGEA5O60502 916 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 OR4Q2P0C623 313 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 PRSS56P0CW18 603 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 CAPN3P20807 821 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 SERPINH1P50454 418 aaKnown RBP9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 ECT2LQ008S8 904 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 TRAP1Q12931 704 aaKnown RBP9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 DGCR6Q14129 220 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 ACAP2Q15057 778 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 MAPRE2Q15555 327 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 SAMD4BQ5PRF9 694 aaKnown RBP9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 CCDC81Q6ZN84 652 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 SCD5Q86SK9 330 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 ACDQ96AP0 544 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 ITPKCQ96DU7 683 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 OMA1Q96E52 524 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 ADI1Q9BV57 179 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 POLR3BQ9NW08 1133 aaPredicted RBP9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 OSER1Q9NX31 292 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 PNMA8BQ9ULN7 279 aaPredicted RBP9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 PCDHGA8Q9Y5G5 932 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 C17orf102A2RUQ5 167 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 CLDN25C9JDP6 229 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 HAS3O00219 553 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 XYLBO75191 536 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 CNTN5O94779 1100 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 CDK14O94921 469 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 S1PR4O95977 384 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 CAPN1P07384 714 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 RBP1P09455 135 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 PIRTP0C851 137 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 CES1P23141 567 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 OXTRP30559 389 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 CCR1P32246 355 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 KPNA2P52292 529 aaKnown RBP9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 PSMD5Q16401 504 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 GEN1Q17RS7 908 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 FAM171BQ6P995 826 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 PLEKHH3Q7Z736 793 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 SLCO6A1Q86UG4 719 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 EPHX4Q8IUS5 362 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 POC5Q8NA72 575 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 PTCD2Q8WV60 388 aaKnown RBP9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 FIG4Q92562 907 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 PBXIP1Q96AQ6 731 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 FEM1CQ96JP0 617 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 TBATAQ96M53 351 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 GLT1D1Q96MS3 346 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 SEPHS2Q99611 448 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 C17orf80Q9BSJ5 609 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 HGH1Q9BTY7 390 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 MUC3BQ9H195 1237 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 CATSPERBQ9H7T0 1116 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 MRM3Q9HC36 420 aaKnown RBP9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 BTRCQ9Y297 605 aa9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 ZFC3H1O60293 1989 aaKnown RBP9.34□□□□□ -0.91
HLA-DOA-201ENST00000229829 UBXN8O00124 270 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 MMP2P08253 660 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 CHRNB1P11230 501 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 TCF3P15923 654 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 MATN1P21941 496 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 PCSK1P29120 753 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 ZNF135P52742 658 aaPredicted RBP9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 TIAL1Q01085 375 aaKnown RBP eCLIP9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 PIK3R6Q5UE93 754 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 FAM45BPQ6NSW5 357 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 ZNF549Q6P9A3 640 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 RTL3Q8N8U3 475 aaKnown RBP9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 OR2T34Q8NGX1 318 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 OR2T3Q8NH03 318 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 FAM45AQ8TCE6 357 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 HMCESQ96FZ2 354 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 UHRF1Q96T88 793 aaPredicted RBP9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 TUBB1Q9H4B7 451 aa9.33□□□□□ -0.92
HLA-DOA-201ENST00000229829 HMG20AQ9NP66 347 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms