RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 MCOLN3Q8TDD5 553 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 ZFAND2BQ8WV99 257 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 NPY6RQ99463 290 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 SMOQ99835 787 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 SMURF2Q9HAU4 748 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 PDLIM7Q9NR12 457 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 VPS4AQ9UN37 437 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 BTBD3Q9Y2F9 522 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 SQORQ9Y6N5 450 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 ARL5CA6NH57 179 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 ALOX15P16050 662 aaPredicted RBP13.64□□□□□ -0.23
NFKB1-201ENST00000226574 SOX4Q06945 474 aaPredicted RBP13.64□□□□□ -0.23
NFKB1-201ENST00000226574 BBS7Q8IWZ6 715 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 SVOPQ8N4V2 548 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 C2orf73Q8N5S3 287 aaPredicted RBP13.64□□□□□ -0.23
NFKB1-201ENST00000226574 H2AFY2Q9P0M6 372 aaPredicted RBP13.64□□□□□ -0.23
NFKB1-201ENST00000226574 TNPO3Q9Y5L0 923 aaKnown RBP13.64□□□□□ -0.23
NFKB1-201ENST00000226574 ST14Q9Y5Y6 855 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 RPP40O75818 363 aaKnown RBP13.64□□□□□ -0.23
NFKB1-201ENST00000226574 ALDH1A1P00352 501 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 OTCP00480 354 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 SPATA31D3P0C874 917 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 ZNF135P52742 658 aaPredicted RBP13.64□□□□□ -0.23
NFKB1-201ENST00000226574 GRB7Q14451 532 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 INAQ16352 499 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 ZNF789Q5FWF6 425 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 ARMCX4Q5H9R4 360 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 SPATA31D4Q6ZUB0 917 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 STYXQ8WUJ0 223 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 PHF21AQ96BD5 680 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 PPP3R2Q96LZ3 170 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 PRDM16Q9HAZ2 1276 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 ITM2CQ9NQX7 267 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 PDP1Q9P0J1 537 aaPredicted RBP13.64□□□□□ -0.23
NFKB1-201ENST00000226574 PGLSO95336 258 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 RRM2P31350 389 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 ACVRL1P37023 503 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 AGTR2P50052 363 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 TPTEP56180 551 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 INCA1Q0VD86 236 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 BRMS1LQ5PSV4 323 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 AFTPHQ6ULP2 937 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 GATAD2AQ86YP4 633 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 ERI1Q8IV48 349 aaKnown RBP13.64□□□□□ -0.23
NFKB1-201ENST00000226574 ELMOD1Q8N336 334 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 ARRDC4Q8NCT1 418 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 DYRK4Q9NR20 520 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 PDE10AQ9Y233 779 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 CAPN14A8MX76 684 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 PRMT5O14744 637 aaPredicted RBP13.63□□□□□ -0.23
NFKB1-201ENST00000226574 TBX1O43435 398 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 CNTN5O94779 1100 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 ATP6V0D1P61421 351 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 MAD2L1Q13257 205 aaPredicted RBP13.63□□□□□ -0.23
NFKB1-201ENST00000226574 LSAMPQ13449 338 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 HNRNPDQ14103 355 aaKnown RBP13.63□□□□□ -0.23
NFKB1-201ENST00000226574 EBPLQ9BY08 206 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 MIR1-1HGQ9H1L0 117 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 TLE6Q9H808 572 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 TOR4AQ9NXH8 423 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 MAP10Q9P2G4 905 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 GMPR2Q9P2T1 348 aaKnown RBP13.63□□□□□ -0.23
NFKB1-201ENST00000226574 EBF1Q9UH73 591 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 ELOVL7A1L3X0 281 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 AKR1A1P14550 325 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 ELK4P28324 431 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 MAPK1P28482 360 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 IST1P53990 364 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 CDKL1Q00532 357 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 SULT2A1Q06520 285 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 ENPEPQ07075 957 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 KIAA0930Q6ICG6 404 aaPredicted RBP13.63□□□□□ -0.23
NFKB1-201ENST00000226574 KIAA0408Q6ZU52 694 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 GPRIN1Q7Z2K8 1008 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 KLHL23Q8NBE8 558 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 TMEM159Q96B96 161 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 CHCHD6Q9BRQ6 235 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 OSGEPL1Q9H4B0 414 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 RAI2Q9Y5P3 530 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 BTBD19C9JJ37 291 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 BCKDKO14874 412 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 SERPINI2O75830 405 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 RPL17P18621 184 aaKnown RBP13.63□□□□□ -0.23
NFKB1-201ENST00000226574 IMPDH1P20839 514 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 DGKAP23743 735 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 IGFBP5P24593 272 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 GPR15P49685 360 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 BLVRAP53004 296 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 SMAD3P84022 425 aaKnown RBP13.63□□□□□ -0.23
NFKB1-201ENST00000226574 MEP1AQ16819 746 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 CCNYL2Q5T2Q4 361 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 GPR153Q6NV75 609 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 ADAMTSL2Q86TH1 951 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 AMER2Q8N7J2 671 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 PIK3C3Q8NEB9 887 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 GTF3C2Q8WUA4 911 aaPredicted RBP13.63□□□□□ -0.23
NFKB1-201ENST00000226574 AURKBQ96GD4 344 aaPredicted RBP13.63□□□□□ -0.23
NFKB1-201ENST00000226574 VPS35Q96QK1 796 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 SORT1Q99523 831 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 WDR83Q9BRX9 315 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms