RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 TRBV23OR9-2A0A075B6M9 112 aa12.53□□□□□ -0.4
LSM5-201ENST00000223084 TCRBV7S3A2A0A539 114 aa12.53□□□□□ -0.4
LSM5-201ENST00000223084 CES2O00748 559 aa12.53□□□□□ -0.4
LSM5-201ENST00000223084 GRID2O43424 1007 aa12.53□□□□□ -0.4
LSM5-201ENST00000223084 OPA1O60313 960 aa12.53□□□□□ -0.4
LSM5-201ENST00000223084 SRP72O76094 671 aaKnown RBP12.53□□□□□ -0.4
LSM5-201ENST00000223084 CDK14O94921 469 aa12.53□□□□□ -0.4
LSM5-201ENST00000223084 PRAMEF1O95521 474 aa12.53□□□□□ -0.4
LSM5-201ENST00000223084 KRT14P02533 472 aa12.53□□□□□ -0.4
LSM5-201ENST00000223084 TCP1P17987 556 aaKnown RBP12.53□□□□□ -0.4
LSM5-201ENST00000223084 RPIAP49247 311 aa12.53□□□□□ -0.4
LSM5-201ENST00000223084 MAZP56270 477 aaKnown RBP12.53□□□□□ -0.4
LSM5-201ENST00000223084 INSM1Q01101 510 aaPredicted RBP12.53□□□□□ -0.4
LSM5-201ENST00000223084 CDH17Q12864 832 aa12.53□□□□□ -0.4
LSM5-201ENST00000223084 PEX6Q13608 980 aa12.53□□□□□ -0.4
LSM5-201ENST00000223084 SMAD1Q15797 465 aaKnown RBP12.53□□□□□ -0.4
LSM5-201ENST00000223084 CYP1B1Q16678 543 aa12.53□□□□□ -0.4
LSM5-201ENST00000223084 GPRC6AQ5T6X5 926 aa12.53□□□□□ -0.4
LSM5-201ENST00000223084 PAPD7Q5XG87 772 aaKnown RBP12.53□□□□□ -0.4
LSM5-201ENST00000223084 CCDC137Q6PK04 289 aaKnown RBP12.53□□□□□ -0.4
LSM5-201ENST00000223084 DTX3LQ8TDB6 740 aa12.53□□□□□ -0.4
LSM5-201ENST00000223084 NAT14Q8WUY8 206 aa12.53□□□□□ -0.4
LSM5-201ENST00000223084 PATE1Q8WXA2 126 aa12.53□□□□□ -0.4
LSM5-201ENST00000223084 CCDC74AQ96AQ1 378 aa12.53□□□□□ -0.4
LSM5-201ENST00000223084 CCDC97Q96F63 343 aaPredicted RBP12.53□□□□□ -0.4
LSM5-201ENST00000223084 NAPGQ99747 312 aaPredicted RBP12.53□□□□□ -0.4
LSM5-201ENST00000223084 RMI1Q9H9A7 625 aa12.53□□□□□ -0.4
LSM5-201ENST00000223084 CASS4Q9NQ75 786 aa12.53□□□□□ -0.4
LSM5-201ENST00000223084 EVA1BQ9NVM1 165 aa12.53□□□□□ -0.4
LSM5-201ENST00000223084 NCKIPSDQ9NZQ3 722 aa12.53□□□□□ -0.4
LSM5-201ENST00000223084 SLC23A2Q9UGH3 650 aa12.53□□□□□ -0.4
LSM5-201ENST00000223084 NEUROG3Q9Y4Z2 214 aa12.53□□□□□ -0.4
LSM5-201ENST00000223084 CEP295Q9C0D2 2601 aa12.52□□□□□ -0.4
LSM5-201ENST00000223084 MROH6A6NGR9 719 aa12.52□□□□□ -0.41
LSM5-201ENST00000223084 CHUKO15111 745 aa12.52□□□□□ -0.41
LSM5-201ENST00000223084 VEGFDO43915 354 aa12.52□□□□□ -0.41
LSM5-201ENST00000223084 PHF2O75151 1096 aa12.52□□□□□ -0.41
LSM5-201ENST00000223084 ECEL1O95672 775 aa12.52□□□□□ -0.41
LSM5-201ENST00000223084 EML2O95834 649 aa12.52□□□□□ -0.41
LSM5-201ENST00000223084 PRSS56P0CW18 603 aa12.52□□□□□ -0.41
LSM5-201ENST00000223084 JUPP14923 745 aa12.52□□□□□ -0.41
LSM5-201ENST00000223084 CDKN1CP49918 316 aaPredicted RBP12.52□□□□□ -0.41
LSM5-201ENST00000223084 ARSDP51689 593 aa12.52□□□□□ -0.41
LSM5-201ENST00000223084 PDE1BQ01064 536 aa12.52□□□□□ -0.41
LSM5-201ENST00000223084 E2F1Q01094 437 aa12.52□□□□□ -0.41
LSM5-201ENST00000223084 TMEM115Q12893 351 aaPredicted RBP12.52□□□□□ -0.41
LSM5-201ENST00000223084 GPS1Q13098 491 aa12.52□□□□□ -0.41
LSM5-201ENST00000223084 NFATC2Q13469 925 aa12.52□□□□□ -0.41
LSM5-201ENST00000223084 ITGA9Q13797 1035 aa12.52□□□□□ -0.41
LSM5-201ENST00000223084 HLTFQ14527 1009 aaKnown RBP eCLIP12.52□□□□□ -0.41
LSM5-201ENST00000223084 C14orf28Q4W4Y0 310 aa12.52□□□□□ -0.41
LSM5-201ENST00000223084 C4orf22Q6V702 233 aa12.52□□□□□ -0.41
LSM5-201ENST00000223084 CCNI2Q6ZMN8 369 aaPredicted RBP12.52□□□□□ -0.41
LSM5-201ENST00000223084 ZNF547Q8IVP9 402 aa12.52□□□□□ -0.41
LSM5-201ENST00000223084 NAGSQ8N159 534 aa12.52□□□□□ -0.41
LSM5-201ENST00000223084 RASGEF1AQ8N9B8 481 aa12.52□□□□□ -0.41
LSM5-201ENST00000223084 DDHD1Q8NEL9 900 aa12.52□□□□□ -0.41
LSM5-201ENST00000223084 MAPK15Q8TD08 544 aa12.52□□□□□ -0.41
LSM5-201ENST00000223084 NAT6Q93015 286 aa12.52□□□□□ -0.41
LSM5-201ENST00000223084 CCDC3Q9BQI4 270 aa12.52□□□□□ -0.41
LSM5-201ENST00000223084 ABCG4Q9H172 646 aa12.52□□□□□ -0.41
LSM5-201ENST00000223084 ASB8Q9H765 288 aa12.52□□□□□ -0.41
LSM5-201ENST00000223084 KLC4Q9NSK0 619 aa12.52□□□□□ -0.41
LSM5-201ENST00000223084 NLE1Q9NVX2 485 aaPredicted RBP12.52□□□□□ -0.41
LSM5-201ENST00000223084 MSRB2Q9Y3D2 182 aa12.52□□□□□ -0.41
LSM5-201ENST00000223084 RNF215Q9Y6U7 377 aa12.52□□□□□ -0.41
LSM5-201ENST00000223084 AKAP13Q12802 2813 aa12.52□□□□□ -0.41
LSM5-201ENST00000223084 CFAP47Q6ZTR5 3102 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 GOLGA6L10A0A0M3HER8 536 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 CTAGE9A4FU28 777 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 FAM221BA6H8Z2 402 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 SNX2O60749 519 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 GAS8O95995 478 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 MT-CO3P00414 261 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 GP1BAP07359 652 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 CDK4P11802 303 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 ZNF7P17097 686 aaPredicted RBP12.51□□□□□ -0.41
LSM5-201ENST00000223084 AKT1P31749 480 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 MC4RP32245 332 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 HADHAP40939 763 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 CTSCP53634 463 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 SESN2P58004 480 aaPredicted RBP12.51□□□□□ -0.41
LSM5-201ENST00000223084 CCL7P80098 99 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 GTF2H3Q13889 308 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 LRP8Q14114 963 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 ZRANB3Q5FWF4 1079 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 LDLRAP1Q5SW96 308 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 ANKRD22Q5VYY1 191 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 DET1Q7L5Y6 550 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 LRRTM4Q86VH4 590 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 TMPRSS12Q86WS5 348 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 CREG2Q8IUH2 290 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 TRAPPC5Q8IUR0 188 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 GALNT15Q8N3T1 639 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 Q8N9G6 341 aaPredicted RBP12.51□□□□□ -0.41
LSM5-201ENST00000223084 STYXQ8WUJ0 223 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 COL26A1Q96A83 441 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 CDKN2AIPNLQ96HQ2 116 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 ZNF778Q96MU6 729 aa12.51□□□□□ -0.41
LSM5-201ENST00000223084 OSGEPL1Q9H4B0 414 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms