RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 SERPINE1P05121 402 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 PKMP14618 531 aaKnown RBP9.35□□□□□ -0.91
CCDC113-201ENST00000219299 CCNG1P51959 295 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 NR1H2P55055 460 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 RAB10P61026 200 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 MPP1Q00013 466 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 SCAPQ12770 1279 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 MYLK3Q32MK0 819 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 PKDCCQ504Y2 493 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 ARMC4Q5T2S8 1044 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 NANOGNBQ7Z5D8 188 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 KCNN1Q92952 543 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 CCDC28BQ9BUN5 200 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 TBC1D10AQ9BXI6 508 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 NOL6Q9H6R4 1146 aaKnown RBP9.35□□□□□ -0.91
CCDC113-201ENST00000219299 ZNF334Q9HCZ1 680 aaPredicted RBP9.35□□□□□ -0.91
CCDC113-201ENST00000219299 KCNK4Q9NYG8 393 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 ARL5AQ9Y689 179 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 GOLGB1Q14789 3259 aaKnown RBP9.35□□□□□ -0.91
CCDC113-201ENST00000219299 TRBV23OR9-2A0A075B6M9 112 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 TULP3O75386 442 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 SMNDC1O75940 238 aaKnown RBP eCLIP9.35□□□□□ -0.91
CCDC113-201ENST00000219299 FTH1P02794 183 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 C2P06681 752 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 VAV1P15498 845 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 KELP23276 732 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 ME2P23368 584 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 SLC10A2Q12908 348 aaPredicted RBP9.35□□□□□ -0.91
CCDC113-201ENST00000219299 RGS21Q2M5E4 152 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 CCDC153Q494R4 210 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 GALNTL6Q49A17 601 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 BEND5Q7L4P6 421 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 SLC22A9Q8IVM8 553 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 OR8H2Q8N162 312 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 ITFG1Q8TB96 612 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 SHKBP1Q8TBC3 707 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 CXorf40BQ96DE9 158 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 TCF7L2Q9NQB0 619 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 FBXL12Q9NXK8 326 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 CD207Q9UJ71 328 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 LTBP1Q14766 1721 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 PNMA8CA0A1B0GUJ8 204 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 UGT1A9O60656 530 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 MFN2O95140 757 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 RPN2P04844 631 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 PCCBP05166 539 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 NUDT17P0C025 328 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 UGT1A6P19224 532 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 UGT1A1P22309 533 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 UGT1A4P22310 534 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 UGT1A3P35503 534 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 UGT1A5P35504 534 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 PRKAA1Q13131 559 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 CERS6Q6ZMG9 384 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 DENND6AQ8IWF6 608 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 SVOPQ8N4V2 548 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 SHDQ96IW2 340 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 PLEKHA8Q96JA3 519 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 SLC22A12Q96S37 553 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 UGT1A7Q9HAW7 530 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 UGT1A10Q9HAW8 530 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 UGT1A8Q9HAW9 530 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 SNX15Q9NRS6 342 aa9.35□□□□□ -0.91
CCDC113-201ENST00000219299 A0A1W2PPM1 405 aa9.34□□□□□ -0.91
CCDC113-201ENST00000219299 OR51F1A6NGY5 319 aa9.34□□□□□ -0.91
CCDC113-201ENST00000219299 ANKRD66B4E2M5 251 aa9.34□□□□□ -0.91
CCDC113-201ENST00000219299 K7ERQ8 282 aa9.34□□□□□ -0.91
CCDC113-201ENST00000219299 QSOX1O00391 747 aa9.34□□□□□ -0.91
CCDC113-201ENST00000219299 SLC35G4P0C7Q5 338 aa9.34□□□□□ -0.91
CCDC113-201ENST00000219299 EPB42P16452 691 aa9.34□□□□□ -0.91
CCDC113-201ENST00000219299 IL12RB1P42701 662 aa9.34□□□□□ -0.91
CCDC113-201ENST00000219299 SLC1A5Q15758 541 aa9.34□□□□□ -0.91
CCDC113-201ENST00000219299 CWF19L1Q69YN2 538 aaKnown RBP9.34□□□□□ -0.91
CCDC113-201ENST00000219299 NPWQ8N729 165 aa9.34□□□□□ -0.91
CCDC113-201ENST00000219299 METTL6Q8TCB7 284 aa9.34□□□□□ -0.91
CCDC113-201ENST00000219299 DNMT3BQ9UBC3 853 aaKnown RBP9.34□□□□□ -0.91
CCDC113-201ENST00000219299 GOT2P00505 430 aaKnown RBP9.34□□□□□ -0.91
CCDC113-201ENST00000219299 ANXA5P08758 320 aa9.34□□□□□ -0.91
CCDC113-201ENST00000219299 PCNAP12004 261 aa9.34□□□□□ -0.91
CCDC113-201ENST00000219299 GLDCP23378 1020 aa9.34□□□□□ -0.91
CCDC113-201ENST00000219299 RPA3P35244 121 aaPredicted RBP9.34□□□□□ -0.91
CCDC113-201ENST00000219299 BLVRAP53004 296 aa9.34□□□□□ -0.91
CCDC113-201ENST00000219299 PLIN5Q00G26 463 aa9.34□□□□□ -0.91
CCDC113-201ENST00000219299 TGM3Q08188 693 aa9.34□□□□□ -0.91
CCDC113-201ENST00000219299 TCHHL1Q5QJ38 904 aaPredicted RBP9.34□□□□□ -0.91
CCDC113-201ENST00000219299 PRMT9Q6P2P2 845 aa9.34□□□□□ -0.91
CCDC113-201ENST00000219299 DPY19L3Q6ZPD9 716 aa9.34□□□□□ -0.91
CCDC113-201ENST00000219299 RINLQ6ZS11 566 aa9.34□□□□□ -0.91
CCDC113-201ENST00000219299 LYSMD3Q7Z3D4 306 aa9.34□□□□□ -0.91
CCDC113-201ENST00000219299 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.34□□□□□ -0.91
CCDC113-201ENST00000219299 BCL7CQ8WUZ0 217 aaPredicted RBP9.34□□□□□ -0.91
CCDC113-201ENST00000219299 PTCD2Q8WV60 388 aaKnown RBP9.34□□□□□ -0.91
CCDC113-201ENST00000219299 THUMPD3Q9BV44 507 aaKnown RBP9.34□□□□□ -0.91
CCDC113-201ENST00000219299 MID1IP1Q9NPA3 183 aa9.34□□□□□ -0.91
CCDC113-201ENST00000219299 DCLK1O15075 740 aa9.34□□□□□ -0.91
CCDC113-201ENST00000219299 KPNA5O15131 536 aa9.34□□□□□ -0.91
CCDC113-201ENST00000219299 SLC1A6P48664 564 aa9.34□□□□□ -0.91
CCDC113-201ENST00000219299 RAB41Q5JT25 222 aa9.34□□□□□ -0.91
CCDC113-201ENST00000219299 RAVER1Q8IY67 606 aaKnown RBP9.34□□□□□ -0.91
CCDC113-201ENST00000219299 IQCKQ8N0W5 287 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms