RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 SLC25A51Q9H1U9 297 aa13.65□□□□□ -0.22
SIX4-201ENST00000216513 ILVBLA1L0T0 632 aa13.65□□□□□ -0.22
SIX4-201ENST00000216513 VIPR1P32241 457 aa13.65□□□□□ -0.22
SIX4-201ENST00000216513 RPL38P63173 70 aaKnown RBP13.65□□□□□ -0.22
SIX4-201ENST00000216513 LRRTM4Q86VH4 590 aa13.65□□□□□ -0.22
SIX4-201ENST00000216513 UNC5BQ8IZJ1 945 aa13.65□□□□□ -0.22
SIX4-201ENST00000216513 LIX1Q8N485 282 aa13.65□□□□□ -0.22
SIX4-201ENST00000216513 HCAR2Q8TDS4 363 aa13.65□□□□□ -0.22
SIX4-201ENST00000216513 TOP1MTQ969P6 601 aa13.65□□□□□ -0.22
SIX4-201ENST00000216513 OLFM3Q96PB7 478 aa13.65□□□□□ -0.22
SIX4-201ENST00000216513 MCM8Q9UJA3 840 aa13.65□□□□□ -0.22
SIX4-201ENST00000216513 PEX11AO75192 247 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 PLGP00747 810 aaPredicted RBP13.64□□□□□ -0.23
SIX4-201ENST00000216513 LYSMD4Q5XG99 296 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 LRRC74BQ6ZQY2 392 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 HOMEZQ8IX15 550 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 A0A0J9YVX5 310 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 C9JVG2 144 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 BUD31P41223 144 aaPredicted RBP13.64□□□□□ -0.23
SIX4-201ENST00000216513 RAB10P61026 200 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 TRIM25Q14258 630 aaKnown RBP13.64□□□□□ -0.23
SIX4-201ENST00000216513 OASLQ15646 514 aaKnown RBP13.64□□□□□ -0.23
SIX4-201ENST00000216513 MAPK11Q15759 364 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 TRIM40Q6P9F5 258 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 BRAT1Q6PJG6 821 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 CREG2Q8IUH2 290 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 KCTD13Q8WZ19 329 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 ZBED3Q96IU2 234 aaPredicted RBP13.64□□□□□ -0.23
SIX4-201ENST00000216513 HAPLN3Q96S86 360 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 DCUN1D5Q9BTE7 237 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 HS3ST4Q9Y661 456 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 MCIDASD6RGH6 385 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 IL12BP29460 328 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 BHLHB9Q6PI77 547 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 DNAJC11Q9NVH1 559 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 SLC24A2Q9UI40 661 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 GJD2Q9UKL4 321 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 KLHL20Q9Y2M5 609 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 PCDHGC5Q9Y5F6 944 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 ARL5AQ9Y689 179 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 SLCO1B7G3V0H7 640 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 CD48P09326 243 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 VAV1P15498 845 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 MS4A13Q5J8X5 152 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 BEND5Q7L4P6 421 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 UXS1Q8NBZ7 420 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 SMOQ99835 787 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 CRTAC1Q9NQ79 661 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 TMEM150CB9EJG8 249 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 PTGES3LE9PB15 166 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 KHNYNO15037 678 aaKnown RBP13.64□□□□□ -0.23
SIX4-201ENST00000216513 UGT1A9O60656 530 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 STATHP02808 62 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 HGFP14210 728 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 UGT1A6P19224 532 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 UGT1A1P22309 533 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 UGT1A4P22310 534 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 PSMA4P25789 261 aaKnown RBP13.64□□□□□ -0.23
SIX4-201ENST00000216513 UGT1A3P35503 534 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 UGT1A5P35504 534 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 SCNN1AP37088 669 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 MAGEA11P43364 429 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 TMEM145Q8NBT3 493 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 GBA3Q9H227 469 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 UGT1A7Q9HAW7 530 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 UGT1A10Q9HAW8 530 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 UGT1A8Q9HAW9 530 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 WDR6Q9NNW5 1121 aaKnown RBP13.64□□□□□ -0.23
SIX4-201ENST00000216513 ZDHHC7Q9NXF8 308 aa13.64□□□□□ -0.23
SIX4-201ENST00000216513 FAM220BPB1ANY3 271 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 TULP2O00295 520 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 ZNF24P17028 368 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 S100A5P33763 92 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 BNC1Q01954 994 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 NAB1Q13506 487 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 NEDD8Q15843 81 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 BNC2Q6ZN30 1099 aaPredicted RBP13.63□□□□□ -0.23
SIX4-201ENST00000216513 C5orf34Q96MH7 638 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 GPR21Q99679 349 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 C1orf50Q9BV19 199 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 GDAP2Q9NXN4 497 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 GSNP06396 782 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 JAK1P23458 1154 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 STK19P49842 368 aaPredicted RBP13.63□□□□□ -0.23
SIX4-201ENST00000216513 ZNF132P52740 706 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 MANFP55145 182 aaKnown RBP13.63□□□□□ -0.23
SIX4-201ENST00000216513 NRG1Q02297 640 aaPredicted RBP13.63□□□□□ -0.23
SIX4-201ENST00000216513 CHRNB3Q05901 458 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 SOX4Q06945 474 aaPredicted RBP13.63□□□□□ -0.23
SIX4-201ENST00000216513 USP53Q70EK8 1073 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 ZNF598Q86UK7 904 aaKnown RBP13.63□□□□□ -0.23
SIX4-201ENST00000216513 RAD21L1Q9H4I0 556 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 DDX18Q9NVP1 670 aaKnown RBP13.63□□□□□ -0.23
SIX4-201ENST00000216513 RCOR3Q9P2K3 495 aaPredicted RBP13.63□□□□□ -0.23
SIX4-201ENST00000216513 MTRRQ9UBK8 725 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 TMCO1Q9UM00 188 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 VWA7Q9Y334 891 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 LRCH4O75427 683 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 DLGAP3O95886 979 aa13.63□□□□□ -0.23
SIX4-201ENST00000216513 OTCP00480 354 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms