RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 UBXN10Q96LJ8 280 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 MYOCQ99972 504 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 LATS2Q9NRM7 1088 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 POLR3BQ9NW08 1133 aaPredicted RBP14.97□□□□□ -0.01
EFNB1-201ENST00000204961 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.97□□□□□ -0.01
EFNB1-201ENST00000204961 CEPT1Q9Y6K0 416 aa14.97□□□□□ -0.01
EFNB1-201ENST00000204961 PLXNA1Q9UIW2 1896 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 ARVCFO00192 962 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 ADAM12O43184 909 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 CAPN1P07384 714 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 HK2P52789 917 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 ESRRGP62508 458 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 RNF19BQ6ZMZ0 732 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 MON1AQ86VX9 555 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 SLC22A9Q8IVM8 553 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 LZTR1Q8N653 840 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 FAM86B1Q8N7N1 296 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 MDGA1Q8NFP4 955 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 TSGA13Q96PP4 275 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 TCF12Q99081 682 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 CSNK1G1Q9HCP0 422 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 ANGPTL3Q9Y5C1 460 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 KIAA0100Q14667 2235 aaKnown RBP14.96□□□□□ -0.01
EFNB1-201ENST00000204961 MYLKQ15746 1914 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 GLTPD2A6NH11 291 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 HAS3O00219 553 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 TNFRSF10BO14763 440 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 PEX11BO96011 259 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 ATXN1LP0C7T5 689 aaKnown RBP14.96□□□□□ -0.01
EFNB1-201ENST00000204961 CD247P20963 164 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 SLC7A1P30825 629 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 FGD3Q5JSP0 725 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 BRMS1LQ5PSV4 323 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 DET1Q7L5Y6 550 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 LIMS2Q7Z4I7 341 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 GALNT5Q7Z7M9 940 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 CHERPQ8IWX8 916 aaKnown RBP14.96□□□□□ -0.01
EFNB1-201ENST00000204961 DLG3Q92796 817 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 WBP2Q969T9 261 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 PGAP3Q96FM1 320 aaPredicted RBP14.96□□□□□ -0.01
EFNB1-201ENST00000204961 PLEKHG4BQ96PX9 1271 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 BOCQ9BWV1 1114 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 TAS2R13Q9NYV9 303 aa14.96□□□□□ -0.01
EFNB1-201ENST00000204961 SDK1Q7Z5N4 2213 aa14.96□□□□□ -0.02
EFNB1-201ENST00000204961 NINQ8N4C6 2090 aa14.96□□□□□ -0.02
EFNB1-201ENST00000204961 GSTA4O15217 222 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 NBNO60934 754 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 C1RP00736 705 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 SLC6A4P31645 630 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 POLR2IP36954 125 aaKnown RBP14.95□□□□□ -0.02
EFNB1-201ENST00000204961 AIF1P55008 147 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 RPL38P63173 70 aaKnown RBP14.95□□□□□ -0.02
EFNB1-201ENST00000204961 CRHR2Q13324 411 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 INPP5AQ14642 412 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 POM121L1PQ3SYA9 428 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 OGFOD2Q6N063 350 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 FAM126BQ8IXS8 530 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 RNF175Q8N4F7 328 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 PYCR2Q96C36 320 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 DUS2Q9NX74 493 aaKnown RBP14.95□□□□□ -0.02
EFNB1-201ENST00000204961 TRMT6Q9UJA5 497 aaKnown RBP14.95□□□□□ -0.02
EFNB1-201ENST00000204961 INVSQ9Y283 1065 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 A0A0U1RQF3 1178 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 F5H5T6 163 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 TRIM24O15164 1050 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 RSL1D1O76021 490 aaKnown RBP14.95□□□□□ -0.02
EFNB1-201ENST00000204961 G6PDP11413 515 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 RAD51Q06609 339 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 PMS2P3Q13401 168 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 DCTN2Q13561 401 aaKnown RBP14.95□□□□□ -0.02
EFNB1-201ENST00000204961 DDX39BQ13838 428 aaKnown RBP14.95□□□□□ -0.02
EFNB1-201ENST00000204961 ATP6AP1LQ52LC2 224 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 RTN4RL1Q86UN2 441 aaPredicted RBP14.95□□□□□ -0.02
EFNB1-201ENST00000204961 AHI1Q8N157 1196 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 ATP6V0D2Q8N8Y2 350 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 PSD4Q8NDX1 1056 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 PNPT1Q8TCS8 783 aaKnown RBP14.95□□□□□ -0.02
EFNB1-201ENST00000204961 DPF3Q92784 378 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 GPR63Q9BZJ6 419 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 E2F6O75461 281 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 ZNF182P17025 639 aaPredicted RBP14.95□□□□□ -0.02
EFNB1-201ENST00000204961 CTBSQ01459 385 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 BFSP2Q13515 415 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 CPSF6Q16630 551 aaKnown RBP eCLIP14.95□□□□□ -0.02
EFNB1-201ENST00000204961 AP5B1Q2VPB7 878 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 NADSYN1Q6IA69 706 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 GCNT7Q6ZNI0 430 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 ZNF467Q7Z7K2 595 aaPredicted RBP14.95□□□□□ -0.02
EFNB1-201ENST00000204961 AUTS2Q8WXX7 1259 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 C12orf43Q96C57 262 aaKnown RBP14.95□□□□□ -0.02
EFNB1-201ENST00000204961 CHID1Q9BWS9 393 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 NSUN3Q9H649 340 aaKnown RBP14.95□□□□□ -0.02
EFNB1-201ENST00000204961 RPF2Q9H7B2 306 aaKnown RBP14.95□□□□□ -0.02
EFNB1-201ENST00000204961 LIMD1Q9UGP4 676 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 DMTF1Q9Y222 760 aa14.95□□□□□ -0.02
EFNB1-201ENST00000204961 CYBBP04839 570 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 IL12AP29459 219 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 CLCN2P51788 898 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 NEK2P51955 445 aa14.94□□□□□ -0.02
EFNB1-201ENST00000204961 FAM189BP81408 668 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms