RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 GRK3P35626 688 aa11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 BRCC3P46736 316 aa11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 IL2P60568 153 aa11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 PTPRNQ16849 979 aa11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 CTC1Q2NKJ3 1217 aa11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 TTLL9Q3SXZ7 439 aa11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 HECTD2Q5U5R9 776 aa11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 MAMDC4Q6UXC1 1216 aa11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 TIFABQ6ZNK6 161 aa11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 GPRIN3Q6ZVF9 776 aa11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 MRPL9Q9BYD2 267 aaKnown RBP11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 HDHD2Q9H0R4 259 aa11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 SH3BP4Q9P0V3 963 aa11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 MTRRQ9UBK8 725 aa11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 PTBP2Q9UKA9 531 aaKnown RBP11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 KLHL20Q9Y2M5 609 aa11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 CAPN14A8MX76 684 aa11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 PGLSO95336 258 aa11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 ACADVLP49748 655 aa11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 RELAQ04206 551 aa11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 ILF2Q12905 390 aaKnown RBP11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 GK3PQ14409 553 aa11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 MED22Q15528 200 aa11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 ZNF423Q2M1K9 1284 aa11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 WSCD1Q658N2 575 aa11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 CLEC4CQ8WTT0 213 aa11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 SLC47A1Q96FL8 570 aa11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 FBRSL1Q9HCM7 1045 aaKnown RBP11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 HEMK1Q9Y5R4 338 aaPredicted RBP11.46□□□□□ -0.57
DNMT3B-201ENST00000201963 DNAJC25-GNG10A0A024R161 153 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 CCDC182A6NF36 153 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 H3BN98 237 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 RAMP2O60895 175 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 CTGFP29279 349 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 RRM2P31350 389 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 POLR2JP52435 117 aaKnown RBP11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 PGGT1BP53609 377 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 MS4A2Q01362 244 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 MAD2L1Q13257 205 aaPredicted RBP11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 RAB39AQ14964 217 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 INTS11Q5TA45 600 aaKnown RBP11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 OVOS1Q6IE37 1185 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 PSRC1Q6PGN9 363 aaPredicted RBP11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 ATP6V0D2Q8N8Y2 350 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 TRPV3Q8NET8 790 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 LPCAT1Q8NF37 534 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 SUN5Q8TC36 379 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 PEBP4Q96S96 227 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 CCNB1IP1Q9NPC3 277 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 CATSPERZQ9NTU4 200 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 MAFBQ9Y5Q3 323 aaPredicted RBP11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 NPHS1O60500 1241 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 UGT2B4P06133 528 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 UMPSP11172 480 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 HOXB8P17481 243 aaPredicted RBP11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 CES1P23141 567 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 PTPN3P26045 913 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 SLC5A2P31639 672 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 L1CAMP32004 1257 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 MYBPC1Q00872 1141 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 SLC22A16Q86VW1 577 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 CAMKK1Q8N5S9 505 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 AADATQ8N5Z0 425 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 ZDHHC7Q9NXF8 308 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 MPP6Q9NZW5 540 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 ZNHIT2Q9UHR6 403 aa11.46□□□□□ -0.58
DNMT3B-201ENST00000201963 GNG14A0A1W2PPG7 69 aa11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 ARPC2O15144 300 aa11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 RGS14O43566 566 aa11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 CXCL14O95715 111 aa11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 ODC1P11926 461 aa11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 IL7RP16871 459 aa11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 IGFBP5P24593 272 aa11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 ASPAP45381 313 aa11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 RECQLP46063 649 aaPredicted RBP11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 NDST2P52849 883 aa11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 TP53BP2Q13625 1128 aa11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 FAM187BQ17R55 369 aa11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 SYT16Q17RD7 645 aa11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 FGD3Q5JSP0 725 aa11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 STXBP5Q5T5C0 1151 aa11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 FAM9CQ8IZT9 166 aa11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 ESAMQ96AP7 390 aa11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 RBM4BQ9BQ04 359 aaKnown RBP11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 RBM4Q9BWF3 364 aaKnown RBP11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 GLOD4Q9HC38 313 aa11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 EXD2Q9NVH0 621 aa11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 SPATA7Q9P0W8 599 aa11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 CRNNQ9UBG3 495 aaPredicted RBP11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 COL2A1P02458 1487 aaPredicted RBP11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 FUOMA2VDF0 154 aa11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 PDE9AO76083 593 aa11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 C22orf31O95567 290 aa11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 MLYCDO95822 493 aa11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 BDNFP23560 247 aa11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 GATMP50440 423 aa11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 MTPNP58546 118 aa11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 ZNF549Q6P9A3 640 aa11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 FBXL19Q6PCT2 694 aa11.45□□□□□ -0.58
DNMT3B-201ENST00000201963 FAM35AQ86V20 835 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms