RNA–Protein interactions for RNA: ENST00000173898.11

TRO-201, Transcript of trophinin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRO, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-201ENST00000173898 VARS2Q5ST30 1063 aaKnown RBP11.94□□□□□ -0.5
TRO-201ENST00000173898 FUT10Q6P4F1 479 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 GALNT5Q7Z7M9 940 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 C17orf64Q86WR6 236 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 MPP5Q8N3R9 675 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 ZBTB2Q8N680 514 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 SH3GLB1Q9Y371 365 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 CHRNGP07510 517 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 SULT2A1Q06520 285 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 FAM46CQ5VWP2 391 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 CES5AQ6NT32 575 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 RNF44Q7L0R7 432 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 UNC5BQ8IZJ1 945 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 UBR7Q8N806 425 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 OR4A15Q8NGL6 344 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 PLEKHO2Q8TD55 490 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 BRSK1Q8TDC3 778 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 SHISA4Q96DD7 197 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 AHCYL2Q96HN2 611 aaKnown RBP11.94□□□□□ -0.5
TRO-201ENST00000173898 ADI1Q9BV57 179 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 RSPH9Q9H1X1 276 aaPredicted RBP11.94□□□□□ -0.5
TRO-201ENST00000173898 MINDY3Q9H8M7 445 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 GTF2IRD1Q9UHL9 959 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 FKBPLQ9UIM3 349 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 OR10H1Q9Y4A9 318 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 MYO5BQ9ULV0 1848 aa11.94□□□□□ -0.5
TRO-201ENST00000173898 NFAT5O94916 1531 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.93□□□□□ -0.5
TRO-201ENST00000173898 CCDC189A1A4V9 331 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 PIP5K1BO14986 540 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 SLC28A2O43868 658 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 OR10H2O60403 315 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 CLDN9O95484 217 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 PRG2P13727 222 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 SELPP16109 830 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 PRDX6P30041 224 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 HOXD13P35453 343 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 CTSKP43235 329 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 NDST2P52849 883 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 SP2Q02086 613 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 TIGD5Q53EQ6 642 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 REP15Q6BDI9 236 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 KIAA0930Q6ICG6 404 aaPredicted RBP11.93□□□□□ -0.5
TRO-201ENST00000173898 CHSY3Q70JA7 882 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 OR8D1Q8WZ84 308 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 TNKS2Q9H2K2 1166 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 PNPLA8Q9NP80 782 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 IMP3Q9NV31 184 aaKnown RBP11.93□□□□□ -0.5
TRO-201ENST00000173898 SMPD3Q9NY59 655 aaPredicted RBP11.93□□□□□ -0.5
TRO-201ENST00000173898 MRPL39Q9NYK5 338 aaKnown RBP11.93□□□□□ -0.5
TRO-201ENST00000173898 CNOT6Q9ULM6 557 aaKnown RBP11.93□□□□□ -0.5
TRO-201ENST00000173898 ZNF510Q9Y2H8 683 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 ZFP37Q9Y6Q3 630 aaPredicted RBP11.93□□□□□ -0.5
TRO-201ENST00000173898 UROSP10746 265 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 NUP62P37198 522 aaPredicted RBP11.93□□□□□ -0.5
TRO-201ENST00000173898 MAPKAPK2P49137 400 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 CDH4P55283 916 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 CHADLQ6NUI6 762 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 LEMD2Q8NC56 503 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 GIPC3Q8TF64 312 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 CLEC4MQ9H2X3 399 aaPredicted RBP11.93□□□□□ -0.5
TRO-201ENST00000173898 MIOSQ9NXC5 875 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 EIF2B4Q9UI10 523 aaKnown RBP11.93□□□□□ -0.5
TRO-201ENST00000173898 RAB26Q9ULW5 256 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 ATRNL1Q5VV63 1379 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 AGRPO00253 132 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 GRM6O15303 877 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 SLC1A2P43004 574 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 RPS9P46781 194 aaKnown RBP11.93□□□□□ -0.5
TRO-201ENST00000173898 ZNF280AP59817 542 aaPredicted RBP11.93□□□□□ -0.5
TRO-201ENST00000173898 IL10RBQ08334 325 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 PITRM1Q5JRX3 1037 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 ARMC3Q5W041 872 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 PTCHD4Q6ZW05 846 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 TMEM110Q86TL2 294 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 C2orf73Q8N5S3 287 aaPredicted RBP11.93□□□□□ -0.5
TRO-201ENST00000173898 LRTOMTQ8WZ04 291 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 MCMBPQ9BTE3 642 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 ZNF536O15090 1300 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 OR2AG2A6NM03 316 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 CXorf49A8MYA2 514 aaPredicted RBP11.93□□□□□ -0.5
TRO-201ENST00000173898 HLA-DQA2P01906 255 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 TMEM198Q66K66 360 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 SLC39A4Q6P5W5 647 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 CLEC20AQ6ZU45 233 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 THAP5Q7Z6K1 395 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 TCAIMQ8N3R3 496 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 ZNF483Q8TF39 744 aaPredicted RBP11.93□□□□□ -0.5
TRO-201ENST00000173898 B3GALT6Q96L58 329 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 FERD3LQ96RJ6 166 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 FAM83DQ9H4H8 585 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 CIDEBQ9UHD4 219 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 SESN1Q9Y6P5 492 aa11.93□□□□□ -0.5
TRO-201ENST00000173898 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.92□□□□□ -0.5
TRO-201ENST00000173898 HTR1BP28222 390 aa11.92□□□□□ -0.5
TRO-201ENST00000173898 RBM23Q86U06 439 aaKnown RBP11.92□□□□□ -0.5
TRO-201ENST00000173898 XAGE5Q8WWM1 108 aa11.92□□□□□ -0.5
TRO-201ENST00000173898 CENPNQ96H22 339 aaPredicted RBP11.92□□□□□ -0.5
TRO-201ENST00000173898 TEFMQ96QE5 360 aaKnown RBP11.92□□□□□ -0.5
TRO-201ENST00000173898 C8orf4Q9NR00 106 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms