RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Cdh6P97326 790 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Rps5P97461 204 aaKnown RBP9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Spata48Q5NC83 441 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 PostnQ62009 838 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Rbl1Q64701 1063 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Churc1Q6DG52 112 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Adgrg6Q6F3F9 1165 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gm21093Q6GQS8 569 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Sarm1Q6PDS3 724 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Adck5Q80V03 582 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Ric8bQ80XE1 520 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Crls1Q80ZM8 303 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Hif1anQ8BLR9 349 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Rd3Q8BRE0 195 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gykl1Q8C635 549 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 CrbnQ8C7D2 445 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Pars2Q8CFI5 475 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 1700001C19RikQ8K168 210 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 D8Ertd738eQ8R1F0 94 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Tmem161aQ8VCA6 480 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Pcdha2Q91Y17 948 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 B3galnt1Q920V1 331 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Dbr1Q923B1 550 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Rnf31Q924T7 1066 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Ddx50Q99MJ9 734 aaKnown RBP9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Ms4a6cQ99N08 217 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Plscr2Q9DCW2 307 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Ndufa13Q9ERS2 144 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Pus3Q9JI38 481 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 RalbQ9JIW9 206 aa9.02□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Stk36Q69ZM6 1316 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gm31371A0A1D5RM70 265 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 4930595M18RikA2RRY9 829 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 4930467E23RikD3Z1P8 350 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gm7951E9Q0A2 213 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Aldh3b2E9Q3E1 479 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gm15319E9Q637 350 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Ceacam3E9Q6J4 706 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Znf296E9Q6W4 445 aaKnown RBP9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gm17124F6ZIG1 213 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Dapk3O54784 448 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 GpiP06745 558 aaKnown RBP9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 S100a6P14069 89 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Nfkb1P25799 971 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Cdc25cP48967 447 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Hnrnpa1P49312 320 aaKnown RBP9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 PkmP52480 531 aaKnown RBP9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Polr1bP70700 1135 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Casp7P97864 303 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 AxlQ00993 888 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Q3TQQ9 903 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Hectd3Q3U487 861 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Prdm6Q3UZD5 596 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Cd6Q61003 665 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 EregQ61521 162 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Adgre1Q61549 931 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Angptl1Q640P2 490 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Scube3Q66PY1 993 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Rapgefl1Q68EF8 662 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Fam124bQ8BLQ0 456 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Metap1Q8BP48 386 aaKnown RBP9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gm21119Q8C646 350 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Wdr11Q8K1X1 1223 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Vmn1r185Q8R299 319 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Olfr522Q8VGL1 312 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Clstn3Q99JH7 956 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Dbndd2Q9CRD4 158 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 ChodlQ9CXM0 273 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Rnf115Q9D0C1 305 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Slc25a18Q9DB41 320 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Dgat2Q9DCV3 388 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Nkain4Q9JMG4 208 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Adamdec1Q9R0X2 467 aa9.01□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gm28510A0A087WP28 240 aa9□□□□□ -0.97
Upf3b-201ENSMUST00000076265 NuggcD3YWJ0 796 aa9□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gm2832F7AEC7 200 aa9□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Olfr596F8VQ26 312 aa9□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Prss12O08762 761 aa9□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Hs3st1O35310 311 aa9□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Tnfrsf18O35714 228 aa9□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Pde9aO70628 534 aa9□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Slc3a2P10852 526 aaKnown RBP9□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Hspa2P17156 633 aa9□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gnat1P20612 350 aa9□□□□□ -0.97
Upf3b-201ENSMUST00000076265 OxtrP97926 388 aa9□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Tie1Q06806 1134 aa9□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Krt80Q0VBK2 452 aa9□□□□□ -0.97
Upf3b-201ENSMUST00000076265 TfptQ3U1J1 259 aa9□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Mier2Q3U3N0 541 aa9□□□□□ -0.97
Upf3b-201ENSMUST00000076265 KizQ3UXL4 695 aa9□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Zc3h12cQ5DTV4 884 aa9□□□□□ -0.97
Upf3b-201ENSMUST00000076265 RragbQ6NTA4 374 aa9□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Prrg3Q6PAQ9 231 aa9□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Osgepl1Q6PEB4 414 aa9□□□□□ -0.97
Upf3b-201ENSMUST00000076265 PstkQ8BP74 359 aa9□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Q8BWQ6 963 aa9□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Apol7cQ8C6E1 369 aa9□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Fam228aQ8CDW1 299 aa9□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Syne4Q8CII8 388 aa9□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Znf628Q8CJ78 1038 aa9□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms