RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Wdr73Q9CWR1 371 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Ilf2Q9CXY6 390 aaKnown RBP14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 CabyrQ9D424 453 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Cab39lQ9DB16 337 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Krt7Q9DCV7 457 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Tor1bQ9ER41 336 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Slc29a1Q9JIM1 460 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Abhd1Q9QZC8 412 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Clcn5Q9WVD4 746 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Pdpk1Q9Z2A0 559 aa14.58□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Piezo2Q8CD54 2822 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Col27a1Q5QNQ9 1845 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Cacna1dQ99246 2179 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Gm31371A0A1D5RM70 265 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 CerklA2AQH1 525 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Itpripl1A2ASA8 547 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Saxo1B1AXP3 476 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Pnldc1B2RXZ1 531 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 4930455H04RikD3Z622 58 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Cyp2j12G3UXT0 502 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Vmn2r65G3X931 845 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Gm3542K7N6U2 270 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Vmn2r21K7N6Y7 853 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Olfr603L7N1Y4 312 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Vmn2r20L7N2B1 853 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Rpl21O09167 160 aaKnown RBP14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Wsb2O54929 404 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Tk1P04184 233 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Il6raP22272 460 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Fpr1P33766 364 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Prdx1P35700 199 aaKnown RBP14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 PpargP37238 505 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 MagohP61327 146 aaKnown RBP14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Ppp2cbP62715 309 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Ppp2caP63330 309 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Creb1Q01147 341 aaKnown RBP14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Pfdn6Q03958 127 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Fpr-rs6Q3SXG2 339 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Osgin2Q3TEE9 550 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Rnf40Q3U319 1001 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Gpr149Q3UVY1 732 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Jak2Q62120 1129 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Tbccd1Q640P7 552 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Foxl1Q64731 336 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Zic5Q7TQ40 622 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Tmem184bQ8BG09 407 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Klf8Q8BLM0 355 aaKnown RBP14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 HadhaQ8BMS1 763 aaKnown RBP14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Nat14Q8BVG8 206 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Cers6Q8C172 384 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Tmem154Q8C4Q9 181 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 TwnkQ8CIW5 685 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Nox1Q8CIZ9 591 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Olfr273Q8VG87 317 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Gtf2a1Q99PM3 378 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 MagohbQ9CQL1 146 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Klhl35Q9CZ49 574 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 4933425L06RikQ9D3Z8 585 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Actn2Q9JI91 894 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Cngb3Q9JJZ9 694 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Krt71Q9R0H5 524 aa14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Ddx39bQ9Z1N5 428 aaKnown RBP14.57□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Plxna2P70207 1894 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Olfr634-ps1A0A1B0GRN7 318 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Fbxo47A2A6H3 451 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Tmem45a2B7ZWJ5 289 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Kifc5bE9PUA5 672 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Klf6O08584 283 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Ess2O70279 479 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Hoxb3P09026 433 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Icam1P13597 537 aaKnown RBP14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Slc2a3P32037 493 aaKnown RBP14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 SgcgP82348 291 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Lingo4Q149C3 593 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Defb48Q3UW22 87 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Zfp91Q62511 572 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Map2k2Q63932 401 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 PapolgQ6PCL9 739 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Fastkd5Q7TMV3 762 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Nek5Q7TSC3 627 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Znf628Q8CJ78 1038 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 SuoxQ8R086 546 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Vmn1r185Q8R299 319 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Dact1Q8R4A3 778 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Arhgef3Q91X46 524 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Olfr459Q924H8 314 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Tcam1Q99NB3 548 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Tbc1d21Q9D9D3 336 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Smad9Q9JIW5 430 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Tp73Q9JJP2 631 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Prokr1Q9JKL1 393 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Ptk2bQ9QVP9 1009 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 PnckQ9QYK9 343 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 PygmQ9WUB3 842 aaKnown RBP14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Kif9Q9WV04 790 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Gm7173A0A0G2JEB6 3132 aa14.56□□□□□ -0.08
Ercc1-201ENSMUST00000003645 PikfyveQ9Z1T6 2097 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Slfn8B1ARD8 910 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Srp54bE9PXC0 504 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Il4i1O09046 630 aa14.55□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms